ECOD: domain e2y5qA1

Domain ID e2y5qA1

A: beta sandwiches
X: Immunoglobulin-like beta-sandwich
H: Immunoglobulin-related
T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like
F: LRR_adjacent

UID:	000142447
Type:	Automatic domain
Parent:	e2omzA1
Range:	A:241-321
Ligands:	ZN
PDB:	2y5q
PDB Description:	INTERNALIN B
UniProt:	P25147
Species:	Listeria monocytogenes

Domain
In chain context
In PDB context

Structure of domain e2y5qA1

Domains in the same chain:

Download Pymol

e2y5qA3	A:33-77	EF-hand	EF-hand-related	EF-hand
e2y5qA2	A:78-241	Single-stranded right-handed beta-helix	Leucine-rich repeats	Leucine-rich repeats
e2y5qA1	A:241-321	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Domains in the same PDB:

e2y5qA3	A:33-77	EF-hand	EF-hand-related	EF-hand
e2y5qA2	A:78-241	Single-stranded right-handed beta-helix	Leucine-rich repeats	Leucine-rich repeats
e2y5qA1	A:241-321	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Structural contacts of domain e2y5qA1 of H-group "Immunoglobulin-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e2y5qA2	A:x,y,z->A:-X,-X+Y,-Z+2/3	Leucine-rich repeats	Interaction Interface Pymol
e2y5qA1	A:x,y,z->A:-X,-X+Y,-Z+2/3	Immunoglobulin-related	Interaction Interface Pymol
e2y5qA2	A:-X,-X+Y,-Z+2/3->A:x,y,z	Leucine-rich repeats	Interaction Interface Pymol
e2y5qA1	A:-X,-X+Y,-Z+2/3->A:x,y,z	Immunoglobulin-related	Interaction Interface Pymol