Domain ID e2y7cB2

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  • A: alpha arrays
  • X: N-terminal helical domain in restriction-modification system methylation subunit-like
  • H: N-terminal helical domain in restriction-modification system methylation subunit
  • T: N-terminal helical domain in restriction-modification system methylation subunit
  • F: HsdM_N
UID: 001551270
Type: Automatic domain
Parent: e2ar0A2
Range: B:1-147,B:480-529
PDB: 2y7c
PDB Description: TYPE I RESTRICTION ENZYME ECOKI M PROTEIN
UniProt: P08957
Species: Escherichia coli

Structure of domain e2y7cB2

Domains in the same chain:

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e2y7cB2 B:1-147,B:480-529 N-terminal helical domain in restriction-modification system methylation subunit-like N-terminal helical domain in restriction-modification system methylation subunit N-terminal helical domain in restriction-modification system methylation subunit
e2y7cB1 B:148-479 Rossmann-like Rossmann-related S-adenosyl-L-methionine-dependent methyltransferases

Domains in the same PDB:

e2y7cA1 A:1-206 DNA methylase specificity domain DNA methylase specificity domain DNA methylase specificity domain
e2y7cA2 A:207-464 DNA methylase specificity domain DNA methylase specificity domain DNA methylase specificity domain
e2y7cB2 B:1-147,B:480-529 N-terminal helical domain in restriction-modification system methylation subunit-like N-terminal helical domain in restriction-modification system methylation subunit N-terminal helical domain in restriction-modification system methylation subunit
e2y7cB1 B:148-479 Rossmann-like Rossmann-related S-adenosyl-L-methionine-dependent methyltransferases
e2y7cC2 C:1-147,C:480-529 N-terminal helical domain in restriction-modification system methylation subunit-like N-terminal helical domain in restriction-modification system methylation subunit N-terminal helical domain in restriction-modification system methylation subunit
e2y7cC1 C:148-479 Rossmann-like Rossmann-related S-adenosyl-L-methionine-dependent methyltransferases
e2y7cD1 D:1-107 HTH B-form DNA mimic Ocr B-form DNA mimic Ocr
e2y7cE1 E:1-106 HTH B-form DNA mimic Ocr B-form DNA mimic Ocr

Structural contacts of domain e2y7cB2 of H-group "N-terminal helical domain in restriction-modification system methylation subunit":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2y7cC2 B:x,y,z->C:X,Y,Z N-terminal helical domain in restriction-modification system methylation subunit Interaction Interface Pymol
e2y7cE1 B:x,y,z->E:X,Y,Z B-form DNA mimic Ocr Interaction Interface Pymol