Domain ID e2ybpA1

Download files:
  • A: beta sandwiches
  • X: jelly-roll
  • H: Double-stranded beta-helix
  • T: Double-stranded beta-helix
  • F: JmjC,JmjN
UID: 000416450
Type: Automatic domain
Parent: e2oq6A1
Range: A:7-355
Ligands: 2HG GOL NI ZN
PDB: 2ybp
PDB Description: LYSINE-SPECIFIC DEMETHYLASE 4A
UniProt: O75164
Hsap BLAST neighbor: O75164
Species: Homo sapiens

Structure of domain e2ybpA1

Structural contacts of domain e2ybpA1 of H-group "Double-stranded beta-helix":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2ybpB1 A:X-1/2,-Y-1/2,-Z-1->B:x,y,z Double-stranded beta-helix Interaction Interface Pymol
e2ybpB1 A:X,Y,Z-1->B:x,y,z Double-stranded beta-helix Interaction Interface Pymol
e2ybpB1 A:x,y,z->B:-X+1/2,Y-1/2,-Z-1 Double-stranded beta-helix Interaction Interface Pymol
e2ybpB1 A:X-1/2,-Y-1/2,-Z->B:x,y,z Double-stranded beta-helix Interaction Interface Pymol
e2ybpB1 A:X,Y,Z->B:x,y,z Double-stranded beta-helix Interaction Interface Pymol
e2ybpB1 A:x,y,z->B:X-1/2,-Y-1/2,-Z-1 Double-stranded beta-helix Interaction Interface Pymol