| UID: | 000421832 |
|---|---|
| Type: | Automatic domain |
| Parent: | e4txgA1 |
| Range: | B:21-266,B:337-396 |
| Ligands: | CX9 GOL |
| PDB: | 2ybu |
| PDB Description: | ACIDIC MAMMALIAN CHITINASE |
| UniProt: | Q9BZP6 |
| Hsap BLAST neighbor: | Q9BZP6 |
| Species: | Homo sapiens |
Structure of domain e2ybuB2
Domains in the same chain:
| e2ybuB2 | B:21-266,B:337-396 | TIM beta/alpha-barrel | TIM barrels | TIM barrels |
| e2ybuB1 | B:267-336 | FKBP-like | Chitinase insertion domain | Chitinase insertion domain |
Domains in the same PDB:
| e2ybuA2 | A:21-266,A:337-396 | TIM beta/alpha-barrel | TIM barrels | TIM barrels |
| e2ybuA1 | A:267-336 | FKBP-like | Chitinase insertion domain | Chitinase insertion domain |
| e2ybuB2 | B:21-266,B:337-396 | TIM beta/alpha-barrel | TIM barrels | TIM barrels |
| e2ybuB1 | B:267-336 | FKBP-like | Chitinase insertion domain | Chitinase insertion domain |
| e2ybuC2 | C:21-266,C:337-396 | TIM beta/alpha-barrel | TIM barrels | TIM barrels |
| e2ybuC1 | C:267-336 | FKBP-like | Chitinase insertion domain | Chitinase insertion domain |
| e2ybuD2 | D:21-266,D:337-396 | TIM beta/alpha-barrel | TIM barrels | TIM barrels |
| e2ybuD1 | D:267-336 | FKBP-like | Chitinase insertion domain | Chitinase insertion domain |
| e2ybuE2 | E:21-266,E:337-396 | TIM beta/alpha-barrel | TIM barrels | TIM barrels |
| e2ybuE1 | E:267-336 | FKBP-like | Chitinase insertion domain | Chitinase insertion domain |
| e2ybuF2 | F:21-266,F:337-396 | TIM beta/alpha-barrel | TIM barrels | TIM barrels |
| e2ybuF1 | F:267-336 | FKBP-like | Chitinase insertion domain | Chitinase insertion domain |
Structural contacts of domain e2ybuB2 of H-group "TIM barrels":
The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.
| Domain ID | Symmetry operator | H-group | Visualization |
|---|---|---|---|
| e2ybuF1 | B:X,Y,Z->F:x,y,z | Chitinase insertion domain | Interaction Interface Pymol |
| e2ybuF2 | B:X,Y,Z->F:x,y,z | TIM barrels | Interaction Interface Pymol |
| e2ybuA2 | B:x,y,z->A:X,Y,Z | TIM barrels | Interaction Interface Pymol |
| e2ybuC2 | B:X,Y,Z->C:x,y,z | TIM barrels | Interaction Interface Pymol |
| e2ybuD2 | B:x,y,z->D:X-1/2,-Y-1/2,-Z-1 | TIM barrels | Interaction Interface Pymol |
| e2ybuD1 | B:-X,Y-1/2,-Z-1/2->D:x,y,z | Chitinase insertion domain | Interaction Interface Pymol |
| e2ybuD2 | B:X,Y,Z->D:x,y,z | TIM barrels | Interaction Interface Pymol |
