Domain ID e2yclA3

Download files:
  • A: a/b three-layered sandwiches
  • X: B12 binding domain in carbon monoxide dehydrogenase corrinoid/iron-sulfur protein gamma subunit
  • H: B12 binding domain in carbon monoxide dehydrogenase corrinoid/iron-sulfur protein gamma subunit
  • T: B12 binding domain in carbon monoxide dehydrogenase corrinoid/iron-sulfur protein gamma subunit
  • F: CdhD
UID: 001148159
Type: Manual and representative domain
Range: A:316-443
Ligands: B12
PDB: 2ycl
PDB Description: CARBON MONOXIDE DEHYDROGENASE CORRINOID/IRON-SULFUR PROTEIN, GAMMA SUBUNIT
UniProt: Q3ACS3
Species:

Structure of domain e2yclA3

Domains in the same chain:

Download Pymol

e2yclA1 A:2-58 Fe-S cluster binding domain in carbon monoxide dehydrogenase corrinoid/iron-sulfur protein gamma subunit Fe-S cluster binding domain in carbon monoxide dehydrogenase corrinoid/iron-sulfur protein gamma subunit Fe-S cluster binding domain in carbon monoxide dehydrogenase corrinoid/iron-sulfur protein gamma subunit
e2yclA2 A:59-315 TIM beta/alpha-barrel TIM barrels TIM barrels
e2yclA3 A:316-443 B12 binding domain in carbon monoxide dehydrogenase corrinoid/iron-sulfur protein gamma subunit B12 binding domain in carbon monoxide dehydrogenase corrinoid/iron-sulfur protein gamma subunit B12 binding domain in carbon monoxide dehydrogenase corrinoid/iron-sulfur protein gamma subunit

Domains in the same PDB:

e2yclA1 A:2-58 Fe-S cluster binding domain in carbon monoxide dehydrogenase corrinoid/iron-sulfur protein gamma subunit Fe-S cluster binding domain in carbon monoxide dehydrogenase corrinoid/iron-sulfur protein gamma subunit Fe-S cluster binding domain in carbon monoxide dehydrogenase corrinoid/iron-sulfur protein gamma subunit
e2yclA2 A:59-315 TIM beta/alpha-barrel TIM barrels TIM barrels
e2yclA3 A:316-443 B12 binding domain in carbon monoxide dehydrogenase corrinoid/iron-sulfur protein gamma subunit B12 binding domain in carbon monoxide dehydrogenase corrinoid/iron-sulfur protein gamma subunit B12 binding domain in carbon monoxide dehydrogenase corrinoid/iron-sulfur protein gamma subunit
e2yclB1 B:2-310 TIM beta/alpha-barrel TIM barrels TIM barrels

Structural contacts of domain e2yclA3 of H-group "B12 binding domain in carbon monoxide dehydrogenase corrinoid/iron-sulfur protein gamma subunit":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2yclB1 A:X,Y,Z->B:x,y,z TIM barrels Interaction Interface Pymol
e2yclA1 A:x,y,z->A:-X+1,Y,-Z+2 Fe-S cluster binding domain in carbon monoxide dehydrogenase corrinoid/iron-sulfur protein gamma subunit Interaction Interface Pymol
e2yclA2 A:x,y,z->A:-X+1,Y,-Z+2 TIM barrels Interaction Interface Pymol
e2yclA2 A:-X+1,Y,-Z+2->A:x,y,z TIM barrels Interaction Interface Pymol
e2yclA1 A:-X+1,Y,-Z+2->A:x,y,z Fe-S cluster binding domain in carbon monoxide dehydrogenase corrinoid/iron-sulfur protein gamma subunit Interaction Interface Pymol
e2yclA2 A:x,y,z->A:X,Y-1,Z TIM barrels Interaction Interface Pymol
e2yclB1 A:x,y,z->B:-X+1/2,Y-1/2,-Z+2 TIM barrels Interaction Interface Pymol
e2yclA3 A:x,y,z->A:-X+1/2,Y-1/2,-Z+2 B12 binding domain in carbon monoxide dehydrogenase corrinoid/iron-sulfur protein gamma subunit Interaction Interface Pymol
e2yclA3 A:-X+1/2,Y-1/2,-Z+2->A:x,y,z B12 binding domain in carbon monoxide dehydrogenase corrinoid/iron-sulfur protein gamma subunit Interaction Interface Pymol
e2yclA2 A:x,y,z->A:-X+1,Y-1,-Z+2 TIM barrels Interaction Interface Pymol
e2yclB1 A:x,y,z->B:X,Y-1,Z TIM barrels Interaction Interface Pymol