ECOD: domain e2yd0A5

Domain ID e2yd0A5

A: beta sandwiches
X: Immunoglobulin-like beta-sandwich
H: Immunoglobulin-related
T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like
F: Unmapped domains

UID:	001725070
Type:	Automatic domain
Parent:	e1z5hA3
Range:	A:530-614
Ligands:	EDO
PDB:	2yd0
PDB Description:	ENDOPLASMIC RETICULUM AMINOPEPTIDASE 1
UniProt:	Q9NZ08
Hsap BLAST neighbor:	Q9NZ08
Species:	Homo sapiens

Domain
In chain context
In PDB context

Structure of domain e2yd0A5

Domains in the same chain:

Download Pymol

e2yd0A4	A:46-253	Baculovirus p35 protein-related	Baculovirus p35 protein-related	Baculovirus p35 protein-related
e2yd0A7	A:254-485,A:514-529	Zincin-like	Metalloproteases ("zincins") catalytic domain	Metalloproteases ("zincins") catalytic domain
e2yd0A5	A:530-614	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2yd0A2	A:615-940	Repetitive alpha hairpins	ARM repeat	ARM repeat

Domains in the same PDB:

e2yd0A4	A:46-253	Baculovirus p35 protein-related	Baculovirus p35 protein-related	Baculovirus p35 protein-related
e2yd0A7	A:254-485,A:514-529	Zincin-like	Metalloproteases ("zincins") catalytic domain	Metalloproteases ("zincins") catalytic domain
e2yd0A5	A:530-614	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2yd0A2	A:615-940	Repetitive alpha hairpins	ARM repeat	ARM repeat

Structural contacts of domain e2yd0A5 of H-group "Immunoglobulin-related":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e2yd0A2	A:x,y,z->A:X-Y,X,Z	ARM repeat	Interaction Interface Pymol