Domain ID e2ydbA1

Download files:
  • A: beta barrels
  • X: LigT-like
  • H: LigT-related
  • T: LigT-related
  • F: CNPase
UID: 000148705
Type: Automatic domain
Parent: e2ilxA1
Range: A:163-378
Ligands: NAP
PDB: 2ydb
PDB Description: 2', 3'-CYCLIC NUCLEOTIDE 3'-PHOSPHODIESTERASE
UniProt: P16330
Hsap BLAST neighbor: P09543
Species: Mus musculus

Structure of domain e2ydbA1

Domains in the same chain:

e2ydbA1 A:163-378 LigT-like LigT-related LigT-related

Domains in the same PDB:

e2ydbA1 A:163-378 LigT-like LigT-related LigT-related

Structural contacts of domain e2ydbA1 of H-group "LigT-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2ydbA1 A:x,y,z->A:-X,Y-1/2,-Z-1/2 LigT-related Interaction Interface Pymol
e2ydbA1 A:-X,Y-1/2,-Z-1/2->A:x,y,z LigT-related Interaction Interface Pymol
e2ydbA1 A:x,y,z->A:X-1/2,-Y+1/2,-Z LigT-related Interaction Interface Pymol
e2ydbA1 A:X-1/2,-Y+1/2,-Z->A:x,y,z LigT-related Interaction Interface Pymol
e2ydbA1 A:x,y,z->A:X-1,Y,Z LigT-related Interaction Interface Pymol
e2ydbA1 A:X-1,Y,Z->A:x,y,z LigT-related Interaction Interface Pymol
e2ydbA1 A:x,y,z->A:-X-1,Y-1/2,-Z-1/2 LigT-related Interaction Interface Pymol
e2ydbA1 A:-X-1,Y-1/2,-Z-1/2->A:x,y,z LigT-related Interaction Interface Pymol
e2ydbA1 A:x,y,z->A:X-1/2,-Y-1/2,-Z LigT-related Interaction Interface Pymol
e2ydbA1 A:X-1/2,-Y-1/2,-Z->A:x,y,z LigT-related Interaction Interface Pymol
e2ydbA1 A:x,y,z->A:X,Y-1,Z LigT-related Interaction Interface Pymol
e2ydbA1 A:X,Y-1,Z->A:x,y,z LigT-related Interaction Interface Pymol