ECOD: domain e2ydrA9

Domain ID e2ydrA9

A: alpha bundles
X: Hyaluronidase domain-like
H: Hyaluronidase post-catalytic domain-like
T: Hyaluronidase post-catalytic domain-like
F: NagJ_C

UID:	001190766
Type:	Automatic domain
Parent:	e2cbiA1
Range:	A:495-618
Ligands:	CD
PDB:	2ydr
PDB Description:	O-GLCNACASE NAGJ
UniProt:	Q0TR53
Species:	Clostridium perfringens

Domain
In chain context
In PDB context

Structure of domain e2ydrA9

Domains in the same chain:

Download Pymol

e2ydrA7	A:40-178	Zincin-like	beta-N-acetylhexosaminidase-like domain	beta-N-acetylhexosaminidase-like domain
e2ydrA8	A:179-494	TIM beta/alpha-barrel	TIM barrels	TIM barrels
e2ydrA9	A:495-618	Hyaluronidase domain-like	Hyaluronidase post-catalytic domain-like	Hyaluronidase post-catalytic domain-like

Domains in the same PDB:

e2ydrA7	A:40-178	Zincin-like	beta-N-acetylhexosaminidase-like domain	beta-N-acetylhexosaminidase-like domain
e2ydrA8	A:179-494	TIM beta/alpha-barrel	TIM barrels	TIM barrels
e2ydrA9	A:495-618	Hyaluronidase domain-like	Hyaluronidase post-catalytic domain-like	Hyaluronidase post-catalytic domain-like

Structural contacts of domain e2ydrA9 of H-group "Hyaluronidase post-catalytic domain-like":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e2ydrA7	A:-Y,X-Y-1,Z+1/3->A:x,y,z	beta-N-acetylhexosaminidase-like domain	Interaction Interface Pymol
e2ydrA8	A:-Y,X-Y-1,Z+1/3->A:x,y,z	TIM barrels	Interaction Interface Pymol