Domain ID e2yewD1

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  • A: beta barrels
  • X: cradle loop barrel
  • H: RIFT-related
  • T: FMN-binding split barrel
  • F: Peptidase_S3
UID: 001117322
Type: Automatic domain
Parent: e1wykA1
Range: D:83-253
PDB: 2yew
PDB Description: CAPSID PROTEIN
UniProt: P89946
Species: Barmah Forest virus

Structure of domain e2yewD1

Domains in the same chain:

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e2yewD1 D:83-253 cradle loop barrel RIFT-related FMN-binding split barrel

Domains in the same PDB:

e2yewA1 A:83-253 cradle loop barrel RIFT-related FMN-binding split barrel
e2yewB2 B:1-292 Viral glycoprotein, central and dimerisation domains-like Viral glycoprotein, central and dimerisation domains Viral glycoprotein, central and dimerisation domains
e2yewB3 B:293-382 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2yewB1 B:387-439 Transmembrane helix of E1 envelope glycoprotein Transmembrane helix of E1 envelope glycoprotein Transmembrane helix of E1 envelope glycoprotein
e2yewC1 C:1-139 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2yewC2 C:140-268 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2yewC3 C:269-341 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2yewD1 D:83-253 cradle loop barrel RIFT-related FMN-binding split barrel
e2yewE1 E:1-292 Viral glycoprotein, central and dimerisation domains-like Viral glycoprotein, central and dimerisation domains Viral glycoprotein, central and dimerisation domains
e2yewE3 E:293-382 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2yewE2 E:383-439 Transmembrane helix of E1 envelope glycoprotein Transmembrane helix of E1 envelope glycoprotein Transmembrane helix of E1 envelope glycoprotein
e2yewF1 F:1-139 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2yewF2 F:140-267 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2yewF3 F:269-341 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2yewG1 G:83-253 cradle loop barrel RIFT-related FMN-binding split barrel
e2yewH1 H:1-292 Viral glycoprotein, central and dimerisation domains-like Viral glycoprotein, central and dimerisation domains Viral glycoprotein, central and dimerisation domains
e2yewH3 H:293-382 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2yewH2 H:383-439 Transmembrane helix of E1 envelope glycoprotein Transmembrane helix of E1 envelope glycoprotein Transmembrane helix of E1 envelope glycoprotein
e2yewI1 I:1-139 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2yewI2 I:140-267 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2yewI3 I:269-341 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2yewJ1 J:83-253 cradle loop barrel RIFT-related FMN-binding split barrel
e2yewK1 K:1-292 Viral glycoprotein, central and dimerisation domains-like Viral glycoprotein, central and dimerisation domains Viral glycoprotein, central and dimerisation domains
e2yewK3 K:293-382 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2yewK2 K:383-439 Transmembrane helix of E1 envelope glycoprotein Transmembrane helix of E1 envelope glycoprotein Transmembrane helix of E1 envelope glycoprotein
e2yewL1 L:1-139 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2yewL2 L:140-267 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2yewL3 L:269-341 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Structural contacts of domain e2yewD1 of H-group "RIFT-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2yewJ1 D:x,y,z->J:X,Y,Z RIFT-related Interaction Interface Pymol
e2yewE2 D:X,Y,Z->E:x,y,z Transmembrane helix of E1 envelope glycoprotein Interaction Interface Pymol
e2yewK2 D:X,Y,Z->K:x,y,z Transmembrane helix of E1 envelope glycoprotein Interaction Interface Pymol