Domain ID e2ygbC3

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  • A: a+b complex topology
  • X: Insertion domain in vaccinia virus scaffolding protein D13
  • H: Insertion domain in vaccinia virus scaffolding protein D13
  • T: Insertion domain in vaccinia virus scaffolding protein D13
  • F: Pox_Rif
UID: 001396764
Type: Automatic domain
Parent: e3samA3
Range: C:271-420
PDB: 2ygb
PDB Description: RIFAMPICIN RESISTANCE PROTEIN
UniProt: P68440
Species:

Structure of domain e2ygbC3

Domains in the same chain:

e2ygbC1 C:15-224 jelly-roll Nucleoplasmin-like/VP (viral coat and capsid proteins) Nucleoplasmin-like/VP (viral coat and capsid proteins)
e2ygbC2 C:225-270,C:421-547 jelly-roll Nucleoplasmin-like/VP (viral coat and capsid proteins) Nucleoplasmin-like/VP (viral coat and capsid proteins)
e2ygbC3 C:271-420 Insertion domain in vaccinia virus scaffolding protein D13 Insertion domain in vaccinia virus scaffolding protein D13 Insertion domain in vaccinia virus scaffolding protein D13

Domains in the same PDB:

e2ygbA1 A:15-224 jelly-roll Nucleoplasmin-like/VP (viral coat and capsid proteins) Nucleoplasmin-like/VP (viral coat and capsid proteins)
e2ygbA2 A:225-270,A:421-547 jelly-roll Nucleoplasmin-like/VP (viral coat and capsid proteins) Nucleoplasmin-like/VP (viral coat and capsid proteins)
e2ygbA3 A:271-420 Insertion domain in vaccinia virus scaffolding protein D13 Insertion domain in vaccinia virus scaffolding protein D13 Insertion domain in vaccinia virus scaffolding protein D13
e2ygbB17 B:15-224 jelly-roll Nucleoplasmin-like/VP (viral coat and capsid proteins) Nucleoplasmin-like/VP (viral coat and capsid proteins)
e2ygbB18 B:225-270,B:421-548 jelly-roll Nucleoplasmin-like/VP (viral coat and capsid proteins) Nucleoplasmin-like/VP (viral coat and capsid proteins)
e2ygbB16 B:271-420 Insertion domain in vaccinia virus scaffolding protein D13 Insertion domain in vaccinia virus scaffolding protein D13 Insertion domain in vaccinia virus scaffolding protein D13
e2ygbC1 C:15-224 jelly-roll Nucleoplasmin-like/VP (viral coat and capsid proteins) Nucleoplasmin-like/VP (viral coat and capsid proteins)
e2ygbC2 C:225-270,C:421-547 jelly-roll Nucleoplasmin-like/VP (viral coat and capsid proteins) Nucleoplasmin-like/VP (viral coat and capsid proteins)
e2ygbC3 C:271-420 Insertion domain in vaccinia virus scaffolding protein D13 Insertion domain in vaccinia virus scaffolding protein D13 Insertion domain in vaccinia virus scaffolding protein D13

Structural contacts of domain e2ygbC3 of H-group "Insertion domain in vaccinia virus scaffolding protein D13":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2ygbB16 C:x,y,z->B:X,Y,Z Insertion domain in vaccinia virus scaffolding protein D13 Interaction Interface Pymol
e2ygbA3 C:x,y,z->A:X,Y,Z Insertion domain in vaccinia virus scaffolding protein D13 Interaction Interface Pymol
e2ygbB16 C:x,y,z->B:X-Y,X,Z+1/6 Insertion domain in vaccinia virus scaffolding protein D13 Interaction Interface Pymol