Domain ID e2yiiB1

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  • A: alpha arrays
  • X: L-aspartase middle domain-like
  • H: L-aspartase middle domain-like
  • T: L-aspartase middle domain-like
  • F: Lyase_aromatic
UID: 001664775
Type: Automatic domain
Parent: e1w27A1
Range: B:233-496,B:620-677
Ligands: BME FMT GOL
PDB: 2yii
PDB Description: PHENYLALANINE AMMONIA-LYASE
UniProt: Q68G84
Hsap BLAST neighbor: P42357
Species:

Structure of domain e2yiiB1

Domains in the same chain:

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e2yiiB2 B:8-232 L-aspartase N-terminal domain-like L-aspartase N-terminal domain-like L-aspartase N-terminal domain-like
e2yiiB1 B:233-496,B:620-677 L-aspartase middle domain-like L-aspartase middle domain-like L-aspartase middle domain-like
e2yiiB3 B:497-619 L-aspartase C-terminal domain-like L-aspartase C-terminal domain-like L-aspartase C-terminal domain-like

Domains in the same PDB:

e2yiiA2 A:9-232 L-aspartase N-terminal domain-like L-aspartase N-terminal domain-like L-aspartase N-terminal domain-like
e2yiiA3 A:233-496,A:620-677 L-aspartase middle domain-like L-aspartase middle domain-like L-aspartase middle domain-like
e2yiiA1 A:497-619 L-aspartase C-terminal domain-like L-aspartase C-terminal domain-like L-aspartase C-terminal domain-like
e2yiiB2 B:8-232 L-aspartase N-terminal domain-like L-aspartase N-terminal domain-like L-aspartase N-terminal domain-like
e2yiiB1 B:233-496,B:620-677 L-aspartase middle domain-like L-aspartase middle domain-like L-aspartase middle domain-like
e2yiiB3 B:497-619 L-aspartase C-terminal domain-like L-aspartase C-terminal domain-like L-aspartase C-terminal domain-like
e2yiiC2 C:9-232 L-aspartase N-terminal domain-like L-aspartase N-terminal domain-like L-aspartase N-terminal domain-like
e2yiiC1 C:233-496,C:620-678 L-aspartase middle domain-like L-aspartase middle domain-like L-aspartase middle domain-like
e2yiiC3 C:497-619 L-aspartase C-terminal domain-like L-aspartase C-terminal domain-like L-aspartase C-terminal domain-like
e2yiiD2 D:9-232 L-aspartase N-terminal domain-like L-aspartase N-terminal domain-like L-aspartase N-terminal domain-like
e2yiiD3 D:233-496,D:620-677 L-aspartase middle domain-like L-aspartase middle domain-like L-aspartase middle domain-like
e2yiiD1 D:497-619 L-aspartase C-terminal domain-like L-aspartase C-terminal domain-like L-aspartase C-terminal domain-like

Structural contacts of domain e2yiiB1 of H-group "L-aspartase middle domain-like":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2yiiA3 B:x,y,z->A:X,Y,Z L-aspartase middle domain-like Interaction Interface Pymol
e2yiiA2 B:x,y,z->A:X,Y,Z L-aspartase N-terminal domain-like Interaction Interface Pymol
e2yiiD3 B:X,Y,Z->D:x,y,z L-aspartase middle domain-like Interaction Interface Pymol
e2yiiD2 B:X,Y,Z->D:x,y,z L-aspartase N-terminal domain-like Interaction Interface Pymol
e2yiiC1 B:X,Y,Z->C:x,y,z L-aspartase middle domain-like Interaction Interface Pymol
e2yiiC3 B:X,Y,Z->C:x,y,z L-aspartase C-terminal domain-like Interaction Interface Pymol
e2yiiD2 B:x,y,z->D:X-1,Y,Z L-aspartase N-terminal domain-like Interaction Interface Pymol
e2yiiD3 B:x,y,z->D:X-1,Y,Z L-aspartase middle domain-like Interaction Interface Pymol