ECOD: domain e2yjfD4

Domain ID e2yjfD4

A: mixed a+b and a/b
X: Ribonuclease H-like
H: Ribonuclease H-like
T: Ribonuclease H-like
F: Actin

UID:	001149827
Type:	Automatic domain
Parent:	e2fxuA2
Range:	D:140-375
Ligands:	ATP MG
PDB:	2yjf
PDB Description:	ACTIN, ALPHA SKELETAL MUSCLE
UniProt:	P68135
Hsap BLAST neighbor:	P68133
Species:	Oryctolagus cuniculus

Domain
In chain context
In PDB context

Structure of domain e2yjfD4

Domains in the same chain:

Download Pymol

e2yjfD3	D:5-139	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e2yjfD4	D:140-375	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like

Domains in the same PDB:

e2yjfA3	A:5-139	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e2yjfA4	A:140-375	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e2yjfB1	B:5-32,B:69-146	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e2yjfB2	B:147-375	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e2yjfC4	C:6-33,C:54-146	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e2yjfC3	C:147-375	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e2yjfD3	D:5-139	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e2yjfD4	D:140-375	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e2yjfE4	E:6-31,E:70-146	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e2yjfE3	E:147-371	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e2yjfM1	M:63-183	RPEL domain	RPEL domain	RPEL domain

Structural contacts of domain e2yjfD4 of H-group "Ribonuclease H-like":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e2yjfA3	D:x,y,z->A:X-Y,X,Z-1/6	Ribonuclease H-like	Interaction Interface Pymol