ECOD: domain e2yjpB2

Domain ID e2yjpB2

A: a/b three-layered sandwiches
X: Periplasmic binding protein-like II
H: Periplasmic binding protein-like II
T: Periplasmic binding protein-like II
F: SBP_bac_3

UID:	001523308
Type:	Automatic domain
Parent:	e1xt8A2
Range:	B:39-136,B:231-284
Ligands:	CYS EDO
PDB:	2yjp
PDB Description:	PUTATIVE ABC TRANSPORTER, PERIPLASMIC BINDING PROTEIN, AMINO ACID
UniProt:	Q5F5B5
Species:

Domains in the same chain:

Download Pymol

e2yjpB2	B:39-136,B:231-284	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II
e2yjpB1	B:137-230	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II

Domains in the same PDB:

e2yjpA1	A:38-136,A:231-284	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II
e2yjpA2	A:137-230	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II
e2yjpB2	B:39-136,B:231-284	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II
e2yjpB1	B:137-230	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II
e2yjpC1	C:39-136,C:231-284	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II
e2yjpC2	C:137-230	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II

Structural contacts of domain e2yjpB2 of H-group "Periplasmic binding protein-like II":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e2yjpA1	B:x,y,z->A:X,Y,Z	Periplasmic binding protein-like II	Interaction Interface Pymol
e2yjpA2	B:x,y,z->A:X,Y,Z	Periplasmic binding protein-like II	Interaction Interface Pymol
e2yjpA1	B:X-1,Y,Z->A:x,y,z	Periplasmic binding protein-like II	Interaction Interface Pymol
e2yjpA1	B:X-1/2,-Y+1/2,-Z->A:x,y,z	Periplasmic binding protein-like II	Interaction Interface Pymol