ECOD: domain e2yk0A1

Domain ID e2yk0A1

A: beta meanders
X: Beta meander domain in PfEMP1 protein
H: Beta meander domain in PfEMP1 protein
T: Beta meander domain in PfEMP1 protein
F: CIDR1_gamma

UID:	001031048
Type:	Manual and representative domain
Range:	A:488-570
Ligands:	MG SO4
PDB:	2yk0
PDB Description:	ERYTHROCYTE MEMBRANE PROTEIN 1
UniProt:	B7T1P0
Species:	Plasmodium falciparum

Domain
In chain context
In PDB context

Structure of domain e2yk0A1

Domains in the same chain:

Download Pymol

e2yk0A2	A:19-304	Duffy-binding-like domain, N-terminal subdomain	Duffy-binding-like domain, N-terminal subdomain	Duffy-binding-like domain, N-terminal subdomain
e2yk0A3	A:305-487	Duffy-binding-like domain, C-terminal subdomain	Duffy-binding-like domain, C-terminal subdomain	Duffy-binding-like domain, C-terminal subdomain
e2yk0A1	A:488-570	Beta meander domain in PfEMP1 protein	Beta meander domain in PfEMP1 protein	Beta meander domain in PfEMP1 protein
e2yk0A4	A:567-716	Duffy-binding-like domain, C-terminal subdomain	Duffy-binding-like domain, C-terminal subdomain	Duffy-binding-like domain, C-terminal subdomain

Domains in the same PDB:

e2yk0A2	A:19-304	Duffy-binding-like domain, N-terminal subdomain	Duffy-binding-like domain, N-terminal subdomain	Duffy-binding-like domain, N-terminal subdomain
e2yk0A3	A:305-487	Duffy-binding-like domain, C-terminal subdomain	Duffy-binding-like domain, C-terminal subdomain	Duffy-binding-like domain, C-terminal subdomain
e2yk0A1	A:488-570	Beta meander domain in PfEMP1 protein	Beta meander domain in PfEMP1 protein	Beta meander domain in PfEMP1 protein
e2yk0A4	A:567-716	Duffy-binding-like domain, C-terminal subdomain	Duffy-binding-like domain, C-terminal subdomain	Duffy-binding-like domain, C-terminal subdomain

Structural contacts of domain e2yk0A1 of H-group "Beta meander domain in PfEMP1 protein":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e2yk0A2	A:x,y,z->A:-X+1/2,Y-1/2,-Z	Duffy-binding-like domain, N-terminal subdomain	Interaction Interface Pymol
e2yk0A2	A:x,y,z->A:-X+1/2,Y-1/2,-Z+1	Duffy-binding-like domain, N-terminal subdomain	Interaction Interface Pymol