Domain ID e2ykqB10

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  • A: a+b two layers
  • X: Alpha-beta plaits
  • H: RNA-binding domain, RBD
  • T: RNA-binding domain, RBD
  • F: Transposase_22
UID: 001173633
Type: Automatic domain
Parent: e2w7aA1
Range: B:154-243
PDB: 2ykq
PDB Description: LINE-1 ORF1P
UniProt: Q9UN81
Hsap BLAST neighbor: Q9UN81
Species: Homo sapiens

Structure of domain e2ykqB10

Structural contacts of domain e2ykqB10 of H-group "RNA-binding domain, RBD":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2ykqC7 B:X,Y,Z->C:x,y,z RNA-binding domain, RBD Interaction Interface Pymol
e2ykqA10 B:x,y,z->A:X,Y,Z RNA-binding domain, RBD Interaction Interface Pymol
e2ykqA10 B:x,y,z->A:X,Y,Z RNA-binding domain, RBD Interaction Interface Pymol
e2ykqA10 B:-X+1,Y-1/2,-Z+1/2->A:x,y,z RNA-binding domain, RBD Interaction Interface Pymol
e2ykqC9 B:x,y,z->C:X-1,Y,Z C-terminal domain in LINE-1 ORF1p Interaction Interface Pymol
e2ykqC9 B:-X+1,Y-1/2,-Z+1/2->C:x,y,z C-terminal domain in LINE-1 ORF1p Interaction Interface Pymol
e2ykqC7 B:x,y,z->C:-X+1,Y-1/2,-Z+1/2 RNA-binding domain, RBD Interaction Interface Pymol