ECOD: domain e2ylmA1

Domain ID e2ylmA1

A: a+b two layers
X: beta-Grasp
H: Ubiquitin-related
T: Ubiquitin-like
F: USP7_ICP0_bdg

UID:	001147780
Type:	Manual and representative domain
Range:	A:555-678
PDB:	2ylm
PDB Description:	UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 7
UniProt:	Q93009
Hsap BLAST neighbor:	Q93009
Species:	Homo sapiens

Domains in the same chain:

Download Pymol

e2ylmA1	A:555-678	beta-Grasp	Ubiquitin-related	Ubiquitin-like
e2ylmA2	A:679-792	beta-Grasp	Ubiquitin-related	Ubiquitin-like
e2ylmA3	A:793-890	beta-Grasp	Ubiquitin-related	Ubiquitin-like
e2ylmA4	A:891-975	beta-Grasp	Ubiquitin-related	Ubiquitin-like
e2ylmA5	A:976-1083	beta-Grasp	Ubiquitin-related	Ubiquitin-like

Domains in the same PDB:

e2ylmA1	A:555-678	beta-Grasp	Ubiquitin-related	Ubiquitin-like
e2ylmA2	A:679-792	beta-Grasp	Ubiquitin-related	Ubiquitin-like
e2ylmA3	A:793-890	beta-Grasp	Ubiquitin-related	Ubiquitin-like
e2ylmA4	A:891-975	beta-Grasp	Ubiquitin-related	Ubiquitin-like
e2ylmA5	A:976-1083	beta-Grasp	Ubiquitin-related	Ubiquitin-like

Structural contacts of domain e2ylmA1 of H-group "Ubiquitin-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e2ylmA5	A:-X,Y-1/2,-Z+1/2->A:x,y,z	Ubiquitin-related	Interaction Interface Pymol
e2ylmA4	A:-X,Y-1/2,-Z+1/2->A:x,y,z	Ubiquitin-related	Interaction Interface Pymol
e2ylmA4	A:x,y,z->A:-X-1/2,-Y+1,Z-1/2	Ubiquitin-related	Interaction Interface Pymol
e2ylmA3	A:x,y,z->A:-X-1/2,-Y+1,Z-1/2	Ubiquitin-related	Interaction Interface Pymol
e2ylmA2	A:x,y,z->A:X-1/2,-Y+3/2,-Z	Ubiquitin-related	Interaction Interface Pymol