ECOD: domain e2ymwB2

Domain ID e2ymwB2

A: a+b complex topology
X: L-Lys epsilon-oxidase C-terminal domain
H: L-Lys epsilon-oxidase C-terminal domain
T: L-Lys epsilon-oxidase C-terminal domain
F: LodA_C

UID:	001113257
Type:	Automatic domain
Parent:	e3weuA2
Range:	B:249-686
Ligands:	EOH GOL NA
PDB:	2ymw
PDB Description:	L-LYSINE 6-OXIDASE
UniProt:	F2JXJ3
Species:

Domain
In chain context
In PDB context

Structure of domain e2ymwB2

Domains in the same chain:

Download Pymol

e2ymwB1	B:2-248	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2ymwB2	B:249-686	L-Lys epsilon-oxidase C-terminal domain	L-Lys epsilon-oxidase C-terminal domain	L-Lys epsilon-oxidase C-terminal domain

Domains in the same PDB:

e2ymwA1	A:2-248	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2ymwA2	A:249-686	L-Lys epsilon-oxidase C-terminal domain	L-Lys epsilon-oxidase C-terminal domain	L-Lys epsilon-oxidase C-terminal domain
e2ymwB1	B:2-248	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2ymwB2	B:249-686	L-Lys epsilon-oxidase C-terminal domain	L-Lys epsilon-oxidase C-terminal domain	L-Lys epsilon-oxidase C-terminal domain

Structural contacts of domain e2ymwB2 of H-group "L-Lys epsilon-oxidase C-terminal domain":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e2ymwB2	B:x,y,z->B:-X+1,Y,-Z	L-Lys epsilon-oxidase C-terminal domain	Interaction Interface Pymol
e2ymwB1	B:x,y,z->B:-X+1,Y,-Z	Immunoglobulin-related	Interaction Interface Pymol
e2ymwB2	B:-X+1,Y,-Z->B:x,y,z	L-Lys epsilon-oxidase C-terminal domain	Interaction Interface Pymol
e2ymwB1	B:-X+1,Y,-Z->B:x,y,z	Immunoglobulin-related	Interaction Interface Pymol
e2ymwA2	B:x,y,z->A:-X+1,Y,-Z	L-Lys epsilon-oxidase C-terminal domain	Interaction Interface Pymol
e2ymwA2	B:x,y,z->A:X,Y,Z	L-Lys epsilon-oxidase C-terminal domain	Interaction Interface Pymol
e2ymwA2	B:X,Y-1,Z->A:x,y,z	L-Lys epsilon-oxidase C-terminal domain	Interaction Interface Pymol
e2ymwB2	B:x,y,z->B:-X,Y,-Z	L-Lys epsilon-oxidase C-terminal domain	Interaction Interface Pymol
e2ymwB2	B:-X,Y,-Z->B:x,y,z	L-Lys epsilon-oxidase C-terminal domain	Interaction Interface Pymol
e2ymwB1	B:x,y,z->B:-X+2,Y,-Z	Immunoglobulin-related	Interaction Interface Pymol
e2ymwB2	B:x,y,z->B:-X+2,Y,-Z	L-Lys epsilon-oxidase C-terminal domain	Interaction Interface Pymol
e2ymwB1	B:-X+2,Y,-Z->B:x,y,z	Immunoglobulin-related	Interaction Interface Pymol
e2ymwB2	B:-X+2,Y,-Z->B:x,y,z	L-Lys epsilon-oxidase C-terminal domain	Interaction Interface Pymol
e2ymwA2	B:-X+1,Y-1,-Z->A:x,y,z	L-Lys epsilon-oxidase C-terminal domain	Interaction Interface Pymol