Domain ID e2yoeJ5

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  • A: beta sandwiches
  • X: Immunoglobulin-like beta-sandwich
  • H: Nicotinic receptor ligand binding domain-like
  • T: Nicotinic receptor ligand binding domain-like
  • F: Neur_chan_LBD
UID: 001258988
Type: Automatic domain
Parent: e1uw6A1
Range: J:11-199
PDB: 2yoe
PDB Description: CYS-LOOP LIGAND-GATED ION CHANNEL
UniProt: P0C7B7
Hsap BLAST neighbor: O75311
Species: Dickeya chrysanthemi

Structure of domain e2yoeJ5

Domains in the same chain:

e2yoeJ5 J:11-199 Immunoglobulin-like beta-sandwich Nicotinic receptor ligand binding domain-like Nicotinic receptor ligand binding domain-like
e2yoeJ6 J:200-317 Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore

Domains in the same PDB:

e2yoeA1 A:11-202 Immunoglobulin-like beta-sandwich Nicotinic receptor ligand binding domain-like Nicotinic receptor ligand binding domain-like
e2yoeA2 A:201-317 Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore
e2yoeB5 B:11-199 Immunoglobulin-like beta-sandwich Nicotinic receptor ligand binding domain-like Nicotinic receptor ligand binding domain-like
e2yoeB6 B:200-317 Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore
e2yoeC5 C:11-199 Immunoglobulin-like beta-sandwich Nicotinic receptor ligand binding domain-like Nicotinic receptor ligand binding domain-like
e2yoeC6 C:200-317 Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore
e2yoeD5 D:11-199 Immunoglobulin-like beta-sandwich Nicotinic receptor ligand binding domain-like Nicotinic receptor ligand binding domain-like
e2yoeD6 D:200-317 Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore
e2yoeE5 E:11-199 Immunoglobulin-like beta-sandwich Nicotinic receptor ligand binding domain-like Nicotinic receptor ligand binding domain-like
e2yoeE6 E:200-317 Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore
e2yoeF5 F:11-199 Immunoglobulin-like beta-sandwich Nicotinic receptor ligand binding domain-like Nicotinic receptor ligand binding domain-like
e2yoeF6 F:200-317 Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore
e2yoeG5 G:11-199 Immunoglobulin-like beta-sandwich Nicotinic receptor ligand binding domain-like Nicotinic receptor ligand binding domain-like
e2yoeG6 G:200-317 Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore
e2yoeH5 H:11-199 Immunoglobulin-like beta-sandwich Nicotinic receptor ligand binding domain-like Nicotinic receptor ligand binding domain-like
e2yoeH6 H:200-317 Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore
e2yoeI5 I:11-199 Immunoglobulin-like beta-sandwich Nicotinic receptor ligand binding domain-like Nicotinic receptor ligand binding domain-like
e2yoeI6 I:200-317 Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore
e2yoeJ5 J:11-199 Immunoglobulin-like beta-sandwich Nicotinic receptor ligand binding domain-like Nicotinic receptor ligand binding domain-like
e2yoeJ6 J:200-317 Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore

Structural contacts of domain e2yoeJ5 of H-group "Nicotinic receptor ligand binding domain-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2yoeF5 J:x,y,z->F:X,Y,Z Nicotinic receptor ligand binding domain-like Interaction Interface Pymol
e2yoeF6 J:x,y,z->F:X,Y,Z Neurotransmitter-gated ion-channel transmembrane pore Interaction Interface Pymol
e2yoeI5 J:x,y,z->I:X,Y,Z Nicotinic receptor ligand binding domain-like Interaction Interface Pymol
e2yoeG6 J:x,y,z->G:X-1,Y,Z Neurotransmitter-gated ion-channel transmembrane pore Interaction Interface Pymol
e2yoeF6 J:x,y,z->F:X-1,Y,Z Neurotransmitter-gated ion-channel transmembrane pore Interaction Interface Pymol