Domain ID e2yojA1

Download files:
  • A: alpha bundles
  • X: helical bundle domain in reverse transcriptase-like polymerases
  • H: helical bundle domain in reverse transcriptase-like polymerases
  • T: helical bundle domain in reverse transcriptase-like polymerases
  • F: RdRP_3
UID: 001106832
Type: Automatic domain
Parent: e1gx5A1
Range: A:353-568
Ligands: 8Y6 PO4
PDB: 2yoj
PDB Description: RNA-DIRECTED RNA POLYMERASE
UniProt: O92972
Species: Hepatitis C virus

Structure of domain e2yojA1

Structural contacts of domain e2yojA1 of H-group "helical bundle domain in reverse transcriptase-like polymerases":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2yojB1 A:-X,Y-1/2,-Z+1/2->B:x,y,z helical bundle domain in reverse transcriptase-like polymerases Interaction Interface Pymol
e2yojB2 A:-X,Y-1/2,-Z+1/2->B:x,y,z Adenylyl and guanylyl cyclase catalytic domain-like Interaction Interface Pymol
e2yojB2 A:-X+1/2,-Y+1,Z-1/2->B:x,y,z Adenylyl and guanylyl cyclase catalytic domain-like Interaction Interface Pymol
e2yojA2 A:-X+1/2,-Y+1,Z-1/2->A:x,y,z Adenylyl and guanylyl cyclase catalytic domain-like Interaction Interface Pymol
e2yojB1 A:-X+1/2,-Y,Z-1/2->B:x,y,z helical bundle domain in reverse transcriptase-like polymerases Interaction Interface Pymol
e2yojB1 A:-X+1,Y-1/2,-Z+1/2->B:x,y,z helical bundle domain in reverse transcriptase-like polymerases Interaction Interface Pymol