Domain ID e2yppB1

Download files:
  • A: a/b barrels
  • X: TIM beta/alpha-barrel
  • H: TIM barrels
  • T: TIM barrels
  • F: DAHP_synth_2
UID: 000980093
Type: Automatic domain
Parent: e2b7oA1
Range: B:1-450
Ligands: CL GOL MN SO4 TYR
PDB: 2ypp
PDB Description: PHOSPHO-2-DEHYDRO-3-DEOXYHEPTONATE ALDOLASE AROG
UniProt: O53512
Species: Mycobacterium tuberculosis

Structure of domain e2yppB1

Structural contacts of domain e2yppB1 of H-group "TIM barrels":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2yppA1 B:x,y,z->A:X,Y,Z TIM barrels Interaction Interface Pymol
e2yppB1 B:x,y,z->B:X-Y,-Y,-Z-2/3 TIM barrels Interaction Interface Pymol
e2yppB1 B:X-Y,-Y,-Z-2/3->B:x,y,z TIM barrels Interaction Interface Pymol
e2yppA1 B:x,y,z->A:X,Y,Z-1 TIM barrels Interaction Interface Pymol
e2yppA1 B:-Y,X-Y-1,Z+2/3->A:x,y,z TIM barrels Interaction Interface Pymol
e2yppB1 B:x,y,z->B:-Y,X-Y-1,Z-1/3 TIM barrels Interaction Interface Pymol
e2yppB1 B:-Y,X-Y-1,Z-1/3->B:x,y,z TIM barrels Interaction Interface Pymol
e2yppA1 B:-Y,X-Y-1,Z-1/3->A:x,y,z TIM barrels Interaction Interface Pymol