ECOD: domain e2yq2A1

Domain ID e2yq2A1

A: beta sandwiches
X: N-terminal domain in envelope glycoprotein E2
H: N-terminal domain in envelope glycoprotein E2
T: N-terminal domain in envelope glycoprotein E2
F: Pestivirus_E2

UID:	000185025
Type:	Manual and representative domain
Range:	A:2-88
PDB:	2yq2
PDB Description:	BVDV1 E2
UniProt:	Q01499
Species:	Bovine viral diarrhea virus 1

Domains in the same chain:

Download Pymol

e2yq2A1	A:2-88	N-terminal domain in envelope glycoprotein E2	N-terminal domain in envelope glycoprotein E2	N-terminal domain in envelope glycoprotein E2
e2yq2A2	A:89-166	Immunoglobulin-like beta-sandwich	Ig-like domain in envelope glycoprotein E2	Ig-like domain in envelope glycoprotein E2
e2yq2A3	A:167-333	C-terminal region of envelope glycoprotein E2	C-terminal region of envelope glycoprotein E2	C-terminal region of envelope glycoprotein E2

Domains in the same PDB:

e2yq2A1	A:2-88	N-terminal domain in envelope glycoprotein E2	N-terminal domain in envelope glycoprotein E2	N-terminal domain in envelope glycoprotein E2
e2yq2A2	A:89-166	Immunoglobulin-like beta-sandwich	Ig-like domain in envelope glycoprotein E2	Ig-like domain in envelope glycoprotein E2
e2yq2A3	A:167-333	C-terminal region of envelope glycoprotein E2	C-terminal region of envelope glycoprotein E2	C-terminal region of envelope glycoprotein E2
e2yq2B2	B:1-87	N-terminal domain in envelope glycoprotein E2	N-terminal domain in envelope glycoprotein E2	N-terminal domain in envelope glycoprotein E2
e2yq2B1	B:88-165	Immunoglobulin-like beta-sandwich	Ig-like domain in envelope glycoprotein E2	Ig-like domain in envelope glycoprotein E2
e2yq2B3	B:166-330	C-terminal region of envelope glycoprotein E2	C-terminal region of envelope glycoprotein E2	C-terminal region of envelope glycoprotein E2

Structural contacts of domain e2yq2A1 of H-group "N-terminal domain in envelope glycoprotein E2":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e2yq2B1	A:x,y,z->B:-X+1/2,Y-1/2,-Z-1	Ig-like domain in envelope glycoprotein E2	Interaction Interface Pymol
e2yq2B2	A:x,y,z->B:-X+1/2,Y-1/2,-Z-1	N-terminal domain in envelope glycoprotein E2	Interaction Interface Pymol
e2yq2A3	A:x,y,z->A:X-1/2,Y+1/2,Z	C-terminal region of envelope glycoprotein E2	Interaction Interface Pymol
e2yq2B1	A:-X,Y,-Z-1->B:x,y,z	Ig-like domain in envelope glycoprotein E2	Interaction Interface Pymol
e2yq2B3	A:-X,Y,-Z-1->B:x,y,z	C-terminal region of envelope glycoprotein E2	Interaction Interface Pymol
e2yq2B2	A:x,y,z->B:X-1,Y,Z+1	N-terminal domain in envelope glycoprotein E2	Interaction Interface Pymol