Domain ID e2yrfB2

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  • A: a/b three-layered sandwiches
  • X: Rossmann-like
  • H: Rossmann-related
  • T: NagB/RpiA/CoA transferase-like
  • F: IF-2B
UID: 001189894
Type: Automatic domain
Parent: e1t5oA1
Range: B:138-349
Ligands: SO4
PDB: 2yrf
PDB Description: METHYLTHIORIBOSE-1-PHOSPHATE ISOMERASE
UniProt: O31662
Hsap BLAST neighbor: Q9BV20
Species: Bacillus subtilis

Structure of domain e2yrfB2

Structural contacts of domain e2yrfB2 of H-group "Rossmann-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2yrfA3 B:x,y,z->A:X,Y,Z Translation initiation factor eIF-2B delta subunit N-terminal helical domain Interaction Interface Pymol
e2yrfA2 B:x,y,z->A:X,Y,Z Rossmann-related Interaction Interface Pymol
e2yrfB2 B:x,y,z->B:-Y+1,X,Z+1/4 Rossmann-related Interaction Interface Pymol
e2yrfB3 B:-Y+1,X,Z+1/4->B:x,y,z Translation initiation factor eIF-2B delta subunit N-terminal helical domain Interaction Interface Pymol
e2yrfB2 B:-Y+1,X,Z+1/4->B:x,y,z Rossmann-related Interaction Interface Pymol
e2yrfA3 B:X,Y-1,Z->A:x,y,z Translation initiation factor eIF-2B delta subunit N-terminal helical domain Interaction Interface Pymol
e2yrfA2 B:X,Y-1,Z->A:x,y,z Rossmann-related Interaction Interface Pymol
e2yrfA2 B:x,y,z->A:-Y+1,X,Z+1/4 Rossmann-related Interaction Interface Pymol