ECOD: domain e2yv5A2

Domain ID e2yv5A2

A: a/b three-layered sandwiches
X: P-loop domains-like
H: P-loop domains-related
T: P-loop containing nucleoside triphosphate hydrolases
F: RsgA_GTPase

UID:	000340102
Type:	Automatic domain
Parent:	e1t9hA2
Range:	A:70-302
Ligands:	CL GDP ZN
PDB:	2yv5
PDB Description:	YJEQ PROTEIN
UniProt:	O66555
Species:	Aquifex aeolicus

Domains in the same chain:

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e2yv5A1	A:1-69	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e2yv5A2	A:70-302	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases

Domains in the same PDB:

e2yv5A1	A:1-69	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e2yv5A2	A:70-302	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases

Structural contacts of domain e2yv5A2 of H-group "P-loop domains-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e2yv5A1	A:x,y,z->A:X-1/2,-Y+1/2,-Z+1/4	Nucleic acid-binding proteins	Interaction Interface Pymol
e2yv5A2	A:x,y,z->A:X-1/2,-Y+1/2,-Z+1/4	P-loop domains-related	Interaction Interface Pymol
e2yv5A2	A:X-1/2,-Y+1/2,-Z+1/4->A:x,y,z	P-loop domains-related	Interaction Interface Pymol
e2yv5A1	A:-Y,-X+1,-Z+1/2->A:x,y,z	Nucleic acid-binding proteins	Interaction Interface Pymol
e2yv5A1	A:x,y,z->A:X,Y-1,Z	Nucleic acid-binding proteins	Interaction Interface Pymol
e2yv5A2	A:x,y,z->A:-Y+1/2,X-1/2,Z-1/4	P-loop domains-related	Interaction Interface Pymol
e2yv5A2	A:-Y+1/2,X-1/2,Z-1/4->A:x,y,z	P-loop domains-related	Interaction Interface Pymol
e2yv5A1	A:-Y+1/2,X+1/2,Z-1/4->A:x,y,z	Nucleic acid-binding proteins	Interaction Interface Pymol