| UID: | 000340102 |
|---|---|
| Type: | Automatic domain |
| Parent: | e1t9hA2 |
| Range: | A:70-302 |
| Ligands: | CL GDP ZN |
| PDB: | 2yv5 |
| PDB Description: | YJEQ PROTEIN |
| UniProt: | O66555 |
| Species: | Aquifex aeolicus |
Structure of domain e2yv5A2
Domains in the same chain:
| e2yv5A1 | A:1-69 | OB-fold | Nucleic acid-binding proteins | Nucleic acid-binding proteins |
| e2yv5A2 | A:70-302 | P-loop domains-like | P-loop domains-related | P-loop containing nucleoside triphosphate hydrolases |
Domains in the same PDB:
| e2yv5A1 | A:1-69 | OB-fold | Nucleic acid-binding proteins | Nucleic acid-binding proteins |
| e2yv5A2 | A:70-302 | P-loop domains-like | P-loop domains-related | P-loop containing nucleoside triphosphate hydrolases |
Structural contacts of domain e2yv5A2 of H-group "P-loop domains-related":
The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.
| Domain ID | Symmetry operator | H-group | Visualization |
|---|---|---|---|
| e2yv5A1 | A:x,y,z->A:X-1/2,-Y+1/2,-Z+1/4 | Nucleic acid-binding proteins | Interaction Interface Pymol |
| e2yv5A2 | A:x,y,z->A:X-1/2,-Y+1/2,-Z+1/4 | P-loop domains-related | Interaction Interface Pymol |
| e2yv5A2 | A:X-1/2,-Y+1/2,-Z+1/4->A:x,y,z | P-loop domains-related | Interaction Interface Pymol |
| e2yv5A1 | A:-Y,-X+1,-Z+1/2->A:x,y,z | Nucleic acid-binding proteins | Interaction Interface Pymol |
| e2yv5A1 | A:x,y,z->A:X,Y-1,Z | Nucleic acid-binding proteins | Interaction Interface Pymol |
| e2yv5A2 | A:x,y,z->A:-Y+1/2,X-1/2,Z-1/4 | P-loop domains-related | Interaction Interface Pymol |
| e2yv5A2 | A:-Y+1/2,X-1/2,Z-1/4->A:x,y,z | P-loop domains-related | Interaction Interface Pymol |
| e2yv5A1 | A:-Y+1/2,X+1/2,Z-1/4->A:x,y,z | Nucleic acid-binding proteins | Interaction Interface Pymol |
