ECOD: domain e2yvcB3

Domain ID e2yvcB3

A: a+b two layers
X: beta-Grasp
H: Ubiquitin-related
T: Ubiquitin-like
F: FERM_N

UID:	000072266
Type:	Automatic domain
Parent:	e1gg3A3
Range:	B:3-87
PDB:	2yvc
PDB Description:	RADIXIN
UniProt:	P26043
Hsap BLAST neighbor:	P35241
Species:	Mus musculus

Domain
In chain context
In PDB context

Structure of domain e2yvcB3

Domains in the same chain:

Download Pymol

e2yvcB3	B:3-87	beta-Grasp	Ubiquitin-related	Ubiquitin-like
e2yvcB2	B:88-198	Acyl-CoA binding protein-like	Acyl-CoA binding protein-like	Acyl-CoA binding protein-like
e2yvcB1	B:199-296	PH domain-like	PH domain-like	PH domain-like

Domains in the same PDB:

e2yvcA3	A:3-87	beta-Grasp	Ubiquitin-related	Ubiquitin-like
e2yvcA2	A:88-198	Acyl-CoA binding protein-like	Acyl-CoA binding protein-like	Acyl-CoA binding protein-like
e2yvcA1	A:199-297	PH domain-like	PH domain-like	PH domain-like
e2yvcB3	B:3-87	beta-Grasp	Ubiquitin-related	Ubiquitin-like
e2yvcB2	B:88-198	Acyl-CoA binding protein-like	Acyl-CoA binding protein-like	Acyl-CoA binding protein-like
e2yvcB1	B:199-296	PH domain-like	PH domain-like	PH domain-like
e2yvcC3	C:5-87	beta-Grasp	Ubiquitin-related	Ubiquitin-like
e2yvcC2	C:88-198	Acyl-CoA binding protein-like	Acyl-CoA binding protein-like	Acyl-CoA binding protein-like
e2yvcC1	C:199-296	PH domain-like	PH domain-like	PH domain-like

Structural contacts of domain e2yvcB3 of H-group "Ubiquitin-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e2yvcA3	B:x,y,z->A:X,Y,Z	Ubiquitin-related	Interaction Interface Pymol
e2yvcA1	B:x,y,z->A:X,Y,Z	PH domain-like	Interaction Interface Pymol
e2yvcC1	B:X,Y,Z->C:x,y,z	PH domain-like	Interaction Interface Pymol