ECOD: domain e2yvjB2

Domain ID e2yvjB2

A: few secondary structure elements
X: Trm112p-like
H: Trm112p-like
T: Trm112p-like
F: Rieske

UID:	000330147
Type:	Automatic domain
Parent:	e1fqtA2
Range:	B:38-81
Ligands:	FES
PDB:	2yvj
PDB Description:	Biphenyl dioxygenase ferredoxin subunit
UniProt:	Q52440
Species:	Pseudomonas sp.

Domain
In chain context
In PDB context

Structure of domain e2yvjB2

Domains in the same chain:

Download Pymol

e2yvjB1	B:2-37,B:82-107	ISP domain	ISP domain	ISP domain
e2yvjB2	B:38-81	Trm112p-like	Trm112p-like	Trm112p-like

Domains in the same PDB:

e2yvjA2	A:5-111,A:233-304	Rossmann-like	Rossmann-related	FAD/NAD(P)-binding domain
e2yvjA3	A:112-232	Rossmann-like	Rossmann-related	FAD/NAD(P)-binding domain
e2yvjA1	A:305-406	FAD-linked reductases, C-terminal domain-like	FAD/NAD-linked reduatases, dimerisation (C-terminal) domain	FAD/NAD-linked reduatases, dimerisation (C-terminal) domain
e2yvjB1	B:2-37,B:82-107	ISP domain	ISP domain	ISP domain
e2yvjB2	B:38-81	Trm112p-like	Trm112p-like	Trm112p-like
e2yvjP2	P:6-111,P:233-304	Rossmann-like	Rossmann-related	FAD/NAD(P)-binding domain
e2yvjP3	P:112-232	Rossmann-like	Rossmann-related	FAD/NAD(P)-binding domain
e2yvjP1	P:305-406	FAD-linked reductases, C-terminal domain-like	FAD/NAD-linked reduatases, dimerisation (C-terminal) domain	FAD/NAD-linked reduatases, dimerisation (C-terminal) domain

Structural contacts of domain e2yvjB2 of H-group "Trm112p-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e2yvjA2	B:x,y,z->A:X,Y,Z	Rossmann-related	Interaction Interface Pymol
e2yvjA1	B:x,y,z->A:X,Y,Z	FAD/NAD-linked reduatases, dimerisation (C-terminal) domain	Interaction Interface Pymol