Domain ID e2ywcA1

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  • A: a/b three-layered sandwiches
  • X: HUP domain-like
  • H: HUP domains
  • T: HUP domains
  • F: Unmapped domains
UID: 000330170
Type: Automatic domain
Parent: e1kqpA1
Range: A:189-382
Ligands: XMP
PDB: 2ywc
PDB Description: GMP SYNTHASE [GLUTAMINE-HYDROLYZING]
UniProt: Q5SI28
Hsap BLAST neighbor: P49915
Species:

Structure of domain e2ywcA1

Domains in the same chain:

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e2ywcA2 A:1-191 Flavodoxin-like Class I glutamine amidotransferase-like Class I glutamine amidotransferase-like
e2ywcA1 A:189-382 HUP domain-like HUP domains HUP domains
e2ywcA3 A:383-503 Alpha-lytic protease prodomain-like GMP synthetase C-terminal dimerisation domain GMP synthetase C-terminal dimerisation domain

Domains in the same PDB:

e2ywcA2 A:1-191 Flavodoxin-like Class I glutamine amidotransferase-like Class I glutamine amidotransferase-like
e2ywcA1 A:189-382 HUP domain-like HUP domains HUP domains
e2ywcA3 A:383-503 Alpha-lytic protease prodomain-like GMP synthetase C-terminal dimerisation domain GMP synthetase C-terminal dimerisation domain
e2ywcB2 B:1-191 Flavodoxin-like Class I glutamine amidotransferase-like Class I glutamine amidotransferase-like
e2ywcB1 B:189-322,B:347-382 HUP domain-like HUP domains HUP domains
e2ywcB3 B:383-503 Alpha-lytic protease prodomain-like GMP synthetase C-terminal dimerisation domain GMP synthetase C-terminal dimerisation domain
e2ywcC2 C:1-191 Flavodoxin-like Class I glutamine amidotransferase-like Class I glutamine amidotransferase-like
e2ywcC1 C:189-322,C:347-382 HUP domain-like HUP domains HUP domains
e2ywcC3 C:383-503 Alpha-lytic protease prodomain-like GMP synthetase C-terminal dimerisation domain GMP synthetase C-terminal dimerisation domain
e2ywcD2 D:1-191 Flavodoxin-like Class I glutamine amidotransferase-like Class I glutamine amidotransferase-like
e2ywcD1 D:189-322,D:348-382 HUP domain-like HUP domains HUP domains
e2ywcD3 D:383-503 Alpha-lytic protease prodomain-like GMP synthetase C-terminal dimerisation domain GMP synthetase C-terminal dimerisation domain

Structural contacts of domain e2ywcA1 of H-group "HUP domains":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2ywcC1 A:X,Y,Z->C:x,y,z HUP domains Interaction Interface Pymol
e2ywcC2 A:X,Y,Z->C:x,y,z Class I glutamine amidotransferase-like Interaction Interface Pymol
e2ywcA2 A:-X-1/2,Y-1/2,-Z+1->A:x,y,z Class I glutamine amidotransferase-like Interaction Interface Pymol
e2ywcC1 A:-X-1/2,Y-1/2,-Z+1->C:x,y,z HUP domains Interaction Interface Pymol