Domain ID e2yxnA1

Download files:
  • A: a/b three-layered sandwiches
  • X: HUP domain-like
  • H: HUP domains
  • T: HUP domains
  • F: tRNA-synt_1b
UID: 000341066
Type: Automatic domain
Parent: e1jilA1
Range: A:1-322
Ligands: AZY
PDB: 2yxn
PDB Description: Tyrosyl-tRNA synthetase
UniProt: P0AGJ9
Hsap BLAST neighbor: Q9Y2Z4
Species:

Structure of domain e2yxnA1

Domains in the same chain:

e2yxnA1 A:1-322 HUP domain-like HUP domains HUP domains

Domains in the same PDB:

e2yxnA1 A:1-322 HUP domain-like HUP domains HUP domains

Structural contacts of domain e2yxnA1 of H-group "HUP domains":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2yxnA1 A:x,y,z->A:Y,X,-Z HUP domains Interaction Interface Pymol
e2yxnA1 A:Y,X,-Z->A:x,y,z HUP domains Interaction Interface Pymol
e2yxnA1 A:x,y,z->A:X-Y,-Y+1,-Z+2/3 HUP domains Interaction Interface Pymol
e2yxnA1 A:X-Y,-Y+1,-Z+2/3->A:x,y,z HUP domains Interaction Interface Pymol
e2yxnA1 A:x,y,z->A:-X,-X+Y,-Z+1/3 HUP domains Interaction Interface Pymol
e2yxnA1 A:-X,-X+Y,-Z+1/3->A:x,y,z HUP domains Interaction Interface Pymol
e2yxnA1 A:x,y,z->A:-Y+1,X-Y+1,Z+1/3 HUP domains Interaction Interface Pymol
e2yxnA1 A:-Y+1,X-Y+1,Z+1/3->A:x,y,z HUP domains Interaction Interface Pymol