ECOD: domain e2z8fB1

Domain ID e2z8fB1

A: a/b three-layered sandwiches
X: Periplasmic binding protein-like II
H: Periplasmic binding protein-like II
T: Periplasmic binding protein-like II
F: SBP_bac_1

UID:	001525830
Type:	Automatic domain
Parent:	e1pc3A2
Range:	B:36-155,B:315-437
Ligands:	MES NA ZN
PDB:	2z8f
PDB Description:	Galacto-N-biose/lacto-N-biose I transporter substrate-binding protein
UniProt:	A8W790
Species:	Bifidobacterium longum

Domains in the same chain:

Download Pymol

e2z8fB1	B:36-155,B:315-437	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II
e2z8fB2	B:156-314	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II

Domains in the same PDB:

e2z8fA1	A:37-155,A:315-437	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II
e2z8fA2	A:156-314	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II
e2z8fB1	B:36-155,B:315-437	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II
e2z8fB2	B:156-314	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II

Structural contacts of domain e2z8fB1 of H-group "Periplasmic binding protein-like II":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e2z8fA1	B:-X+1,-Y,Z-1/2->A:x,y,z	Periplasmic binding protein-like II	Interaction Interface Pymol
e2z8fA2	B:-X+1/2,-Y+1/2,Z-1/2->A:x,y,z	Periplasmic binding protein-like II	Interaction Interface Pymol
e2z8fB1	B:x,y,z->B:X,-Y,-Z+1	Periplasmic binding protein-like II	Interaction Interface Pymol
e2z8fB2	B:x,y,z->B:X,-Y,-Z+1	Periplasmic binding protein-like II	Interaction Interface Pymol
e2z8fB2	B:X,-Y,-Z+1->B:x,y,z	Periplasmic binding protein-like II	Interaction Interface Pymol
e2z8fB1	B:X,-Y,-Z+1->B:x,y,z	Periplasmic binding protein-like II	Interaction Interface Pymol
e2z8fA1	B:x,y,z->A:X,-Y,-Z+1	Periplasmic binding protein-like II	Interaction Interface Pymol
e2z8fB2	B:X-1/2,-Y+1/2,-Z+1->B:x,y,z	Periplasmic binding protein-like II	Interaction Interface Pymol