| UID: | 000342929 |
|---|---|
| Type: | Automatic domain |
| Parent: | e1iowA1 |
| Range: | B:115-319 |
| Ligands: | ADP |
| PDB: | 2zdg |
| PDB Description: | D-ALANINE--D-ALANINE LIGASE |
| UniProt: | Q5SHZ3 |
| Species: |
Structure of domain e2zdgB1
Domains in the same chain:
| e2zdgB2 | B:1-114 | Rossmann-like | Rossmann-related | PreATP-grasp domain |
| e2zdgB1 | B:115-319 | Protein kinase/SAICAR synthase/ATP-grasp | Protein kinase/SAICAR synthase/ATP-grasp | ATP-grasp |
Domains in the same PDB:
Structural contacts of domain e2zdgB1 of H-group "Protein kinase/SAICAR synthase/ATP-grasp":
The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.
| Domain ID | Symmetry operator | H-group | Visualization |
|---|---|---|---|
| e2zdgA1 | B:x,y,z->A:X,Y,Z | Protein kinase/SAICAR synthase/ATP-grasp | Interaction Interface Pymol |
| e2zdgA2 | B:x,y,z->A:X,Y,Z | Rossmann-related | Interaction Interface Pymol |
| e2zdgD1 | B:-X+1,Y-1/2,-Z+1/2->D:x,y,z | Protein kinase/SAICAR synthase/ATP-grasp | Interaction Interface Pymol |
| e2zdgC1 | B:x,y,z->C:-X+1/2,-Y+1,Z-1/2 | Protein kinase/SAICAR synthase/ATP-grasp | Interaction Interface Pymol |
| e2zdgC2 | B:x,y,z->C:-X+1/2,-Y+1,Z-1/2 | Rossmann-related | Interaction Interface Pymol |
| e2zdgA2 | B:-X+1,Y-1/2,-Z+1/2->A:x,y,z | Rossmann-related | Interaction Interface Pymol |
