ECOD: domain e2zivB3

Domain ID e2zivB3

A: alpha arrays
X: HhH/H2TH
H: SAM/DNA-glycosylase
T: SAM domain-like
F: EME1-MUS81_C

UID:	001156208
Type:	Automatic domain
Parent:	e2ziuA8
Range:	B:451-568
PDB:	2ziv
PDB Description:	Crossover junction endonuclease EME1
UniProt:	Q96AY2
Hsap BLAST neighbor:	Q96AY2
Species:	Danio rerio

Domains in the same chain:

Download Pymol

e2zivB4	B:247-367,B:404-447	Restriction endonuclease-like	Restriction endonuclease-like	Restriction endonuclease-like
e2zivB3	B:451-568	HhH/H2TH	SAM/DNA-glycosylase	SAM domain-like

Domains in the same PDB:

e2zivA3	A:311-366,A:388-526	Restriction endonuclease-like	Restriction endonuclease-like	Restriction endonuclease-like
e2zivA2	A:527-612	HhH/H2TH	SAM/DNA-glycosylase	SAM domain-like
e2zivB4	B:247-367,B:404-447	Restriction endonuclease-like	Restriction endonuclease-like	Restriction endonuclease-like
e2zivB3	B:451-568	HhH/H2TH	SAM/DNA-glycosylase	SAM domain-like

Structural contacts of domain e2zivB3 of H-group "SAM/DNA-glycosylase":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e2zivA3	B:x,y,z->A:X,Y,Z	Restriction endonuclease-like	Interaction Interface Pymol
e2zivA2	B:x,y,z->A:X,Y,Z	SAM/DNA-glycosylase	Interaction Interface Pymol
e2zivB3	B:x,y,z->B:Y,X,-Z+1	SAM/DNA-glycosylase	Interaction Interface Pymol
e2zivB3	B:Y,X,-Z+1->B:x,y,z	SAM/DNA-glycosylase	Interaction Interface Pymol
e2zivA2	B:x,y,z->A:Y,X,-Z+1	SAM/DNA-glycosylase	Interaction Interface Pymol
e2zivA3	B:x,y,z->A:Y,X,-Z+1	Restriction endonuclease-like	Interaction Interface Pymol
e2zivA3	B:x,y,z->A:-Y+1,X-Y+1,Z+1/3	Restriction endonuclease-like	Interaction Interface Pymol