| UID: | 001156208 |
|---|---|
| Type: | Automatic domain |
| Parent: | e2ziuA8 |
| Range: | B:451-568 |
| PDB: | 2ziv |
| PDB Description: | Crossover junction endonuclease EME1 |
| UniProt: | Q96AY2 |
| Hsap BLAST neighbor: | Q96AY2 |
| Species: | Danio rerio |
Structure of domain e2zivB3
Domains in the same chain:
| e2zivB4 | B:247-367,B:404-447 | Restriction endonuclease-like | Restriction endonuclease-like | Restriction endonuclease-like |
| e2zivB3 | B:451-568 | HhH/H2TH | SAM/DNA-glycosylase | SAM domain-like |
Domains in the same PDB:
| e2zivA3 | A:311-366,A:388-526 | Restriction endonuclease-like | Restriction endonuclease-like | Restriction endonuclease-like |
| e2zivA2 | A:527-612 | HhH/H2TH | SAM/DNA-glycosylase | SAM domain-like |
| e2zivB4 | B:247-367,B:404-447 | Restriction endonuclease-like | Restriction endonuclease-like | Restriction endonuclease-like |
| e2zivB3 | B:451-568 | HhH/H2TH | SAM/DNA-glycosylase | SAM domain-like |
Structural contacts of domain e2zivB3 of H-group "SAM/DNA-glycosylase":
The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.
| Domain ID | Symmetry operator | H-group | Visualization |
|---|---|---|---|
| e2zivA3 | B:x,y,z->A:X,Y,Z | Restriction endonuclease-like | Interaction Interface Pymol |
| e2zivA2 | B:x,y,z->A:X,Y,Z | SAM/DNA-glycosylase | Interaction Interface Pymol |
| e2zivB3 | B:x,y,z->B:Y,X,-Z+1 | SAM/DNA-glycosylase | Interaction Interface Pymol |
| e2zivB3 | B:Y,X,-Z+1->B:x,y,z | SAM/DNA-glycosylase | Interaction Interface Pymol |
| e2zivA2 | B:x,y,z->A:Y,X,-Z+1 | SAM/DNA-glycosylase | Interaction Interface Pymol |
| e2zivA3 | B:x,y,z->A:Y,X,-Z+1 | Restriction endonuclease-like | Interaction Interface Pymol |
| e2zivA3 | B:x,y,z->A:-Y+1,X-Y+1,Z+1/3 | Restriction endonuclease-like | Interaction Interface Pymol |
