Domain ID e2zjcB1

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  • A: beta sandwiches
  • X: jelly-roll
  • H: TNF-like
  • T: TNF-like
  • F: TNF
UID: 000356475
Type: Automatic domain
Parent: e1alyA1
Range: B:7-157
Ligands: GOL
PDB: 2zjc
PDB Description: Tumor necrosis factor
UniProt: P01375
Hsap BLAST neighbor: P01375
Species: Homo sapiens

Structure of domain e2zjcB1

Domains in the same chain:

e2zjcB1 B:7-157 jelly-roll TNF-like TNF-like

Domains in the same PDB:

e2zjcA1 A:8-157 jelly-roll TNF-like TNF-like
e2zjcB1 B:7-157 jelly-roll TNF-like TNF-like
e2zjcC1 C:8-157 jelly-roll TNF-like TNF-like

Structural contacts of domain e2zjcB1 of H-group "TNF-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2zjcC1 B:X,Y,Z->C:x,y,z TNF-like Interaction Interface Pymol
e2zjcA1 B:x,y,z->A:X,Y,Z TNF-like Interaction Interface Pymol
e2zjcC1 B:x,y,z->C:-X+Y-1/3,-X+1/3,Z+1/3 TNF-like Interaction Interface Pymol
e2zjcA1 B:x,y,z->A:-Y,X-Y,Z TNF-like Interaction Interface Pymol
e2zjcA1 B:X,Y,Z-1->A:x,y,z TNF-like Interaction Interface Pymol
e2zjcA1 B:x,y,z->A:-X+Y-1/3,-X+1/3,Z+1/3 TNF-like Interaction Interface Pymol
e2zjcC1 B:x,y,z->C:-Y+2/3,X-Y+1/3,Z+1/3 TNF-like Interaction Interface Pymol
e2zjcB1 B:x,y,z->B:-Y,X-Y,Z TNF-like Interaction Interface Pymol
e2zjcB1 B:-Y,X-Y,Z->B:x,y,z TNF-like Interaction Interface Pymol
e2zjcB1 B:x,y,z->B:-X+Y-1/3,-X+1/3,Z-2/3 TNF-like Interaction Interface Pymol
e2zjcB1 B:-X+Y-1/3,-X+1/3,Z-2/3->B:x,y,z TNF-like Interaction Interface Pymol