Domain ID e2zp1A1

Download files:
  • A: a/b three-layered sandwiches
  • X: HUP domain-like
  • H: HUP domains
  • T: HUP domains
  • F: tRNA-synt_1b
UID: 000357871
Type: Automatic domain
Parent: e1j1uA1
Range: A:1-308
Ligands: IYR
PDB: 2zp1
PDB Description: Tyrosyl-tRNA synthetase
UniProt: Q57834
Hsap BLAST neighbor: P54577
Species: Methanocaldococcus jannaschii

Structure of domain e2zp1A1

Domains in the same chain:

e2zp1A1 A:1-308 HUP domain-like HUP domains HUP domains

Domains in the same PDB:

e2zp1A1 A:1-308 HUP domain-like HUP domains HUP domains

Structural contacts of domain e2zp1A1 of H-group "HUP domains":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2zp1A1 A:x,y,z->A:Y,X,-Z HUP domains Interaction Interface Pymol
e2zp1A1 A:Y,X,-Z->A:x,y,z HUP domains Interaction Interface Pymol
e2zp1A1 A:x,y,z->A:Y,X,-Z+1 HUP domains Interaction Interface Pymol
e2zp1A1 A:Y,X,-Z+1->A:x,y,z HUP domains Interaction Interface Pymol
e2zp1A1 A:x,y,z->A:-Y+1/2,X+1/2,Z-1/4 HUP domains Interaction Interface Pymol
e2zp1A1 A:-Y+1/2,X+1/2,Z-1/4->A:x,y,z HUP domains Interaction Interface Pymol
e2zp1A1 A:x,y,z->A:-Y+1/2,X+1/2,Z+3/4 HUP domains Interaction Interface Pymol
e2zp1A1 A:-Y+1/2,X+1/2,Z+3/4->A:x,y,z HUP domains Interaction Interface Pymol
e2zp1A1 A:x,y,z->A:X-1/2,-Y+1/2,-Z+1/4 HUP domains Interaction Interface Pymol
e2zp1A1 A:X-1/2,-Y+1/2,-Z+1/4->A:x,y,z HUP domains Interaction Interface Pymol