Domain ID e2zsuD3

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  • A: a/b three-layered sandwiches
  • X: Rossmann-like
  • H: Rossmann-related
  • T: S-adenosyl-L-methionine-dependent methyltransferases
  • F: Spermine_synth
UID: 001279135
Type: Automatic domain
Parent: e1inlA3
Range: D:58-280
PDB: 2zsu
PDB Description: SPERMIDINE SYNTHASE
UniProt: O57950
Hsap BLAST neighbor: P19623
Species: Pyrococcus horikoshii

Structure of domain e2zsuD3

Domains in the same chain:

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e2zsuD2 D:4-57 Spermidine synthase tetramerisation domain Spermidine synthase tetramerisation domain Spermidine synthase tetramerisation domain
e2zsuD3 D:58-280 Rossmann-like Rossmann-related S-adenosyl-L-methionine-dependent methyltransferases

Domains in the same PDB:

e2zsuA2 A:1-57 Spermidine synthase tetramerisation domain Spermidine synthase tetramerisation domain Spermidine synthase tetramerisation domain
e2zsuA3 A:58-280 Rossmann-like Rossmann-related S-adenosyl-L-methionine-dependent methyltransferases
e2zsuB2 B:3-57 Spermidine synthase tetramerisation domain Spermidine synthase tetramerisation domain Spermidine synthase tetramerisation domain
e2zsuB3 B:58-280 Rossmann-like Rossmann-related S-adenosyl-L-methionine-dependent methyltransferases
e2zsuC2 C:4-57 Spermidine synthase tetramerisation domain Spermidine synthase tetramerisation domain Spermidine synthase tetramerisation domain
e2zsuC3 C:58-280 Rossmann-like Rossmann-related S-adenosyl-L-methionine-dependent methyltransferases
e2zsuD2 D:4-57 Spermidine synthase tetramerisation domain Spermidine synthase tetramerisation domain Spermidine synthase tetramerisation domain
e2zsuD3 D:58-280 Rossmann-like Rossmann-related S-adenosyl-L-methionine-dependent methyltransferases
e2zsuE2 E:2-57 Spermidine synthase tetramerisation domain Spermidine synthase tetramerisation domain Spermidine synthase tetramerisation domain
e2zsuE3 E:58-280 Rossmann-like Rossmann-related S-adenosyl-L-methionine-dependent methyltransferases
e2zsuF2 F:4-57 Spermidine synthase tetramerisation domain Spermidine synthase tetramerisation domain Spermidine synthase tetramerisation domain
e2zsuF3 F:58-280 Rossmann-like Rossmann-related S-adenosyl-L-methionine-dependent methyltransferases

Structural contacts of domain e2zsuD3 of H-group "Rossmann-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2zsuC3 D:x,y,z->C:X,Y,Z Rossmann-related Interaction Interface Pymol
e2zsuB3 D:x,y,z->B:X,Y,Z Rossmann-related Interaction Interface Pymol
e2zsuB3 D:x,y,z->B:X-1,Y,Z Rossmann-related Interaction Interface Pymol
e2zsuE3 D:X,Y,Z->E:x,y,z Rossmann-related Interaction Interface Pymol
e2zsuA2 D:x,y,z->A:X-1,Y,Z-1 Spermidine synthase tetramerisation domain Interaction Interface Pymol
e2zsuA3 D:x,y,z->A:X-1,Y,Z-1 Rossmann-related Interaction Interface Pymol