ECOD: domain e2zutD3

Domain ID e2zutD3

A: a/b three-layered sandwiches
X: Flavodoxin-like
H: Class I glutamine amidotransferase-like
T: Class I glutamine amidotransferase-like
F: LBP_M

UID:	001837872
Type:	Automatic domain
Parent:	e2zuuB1
Range:	D:437-694
Ligands:	A2G GOL
PDB:	2zut
PDB Description:	Lacto-N-biose phosphorylase
UniProt:	E8MF13
Species:	Bifidobacterium longum

Domain
In chain context
In PDB context

Structure of domain e2zutD3

Domains in the same chain:

Download Pymol

e2zutD1	D:3-446	TIM beta/alpha-barrel	TIM barrels	TIM barrels
e2zutD3	D:437-694	Flavodoxin-like	Class I glutamine amidotransferase-like	Class I glutamine amidotransferase-like
e2zutD2	D:695-750	Glycosyl hydrolase domain-like	Glycosyl hydrolase domain	Glycosyl hydrolase domain

Domains in the same PDB:

e2zutA1	A:3-446	TIM beta/alpha-barrel	TIM barrels	TIM barrels
e2zutA2	A:437-694	Flavodoxin-like	Class I glutamine amidotransferase-like	Class I glutamine amidotransferase-like
e2zutA3	A:695-754	Glycosyl hydrolase domain-like	Glycosyl hydrolase domain	Glycosyl hydrolase domain
e2zutB2	B:3-446	TIM beta/alpha-barrel	TIM barrels	TIM barrels
e2zutB3	B:437-694	Flavodoxin-like	Class I glutamine amidotransferase-like	Class I glutamine amidotransferase-like
e2zutB1	B:695-749	Glycosyl hydrolase domain-like	Glycosyl hydrolase domain	Glycosyl hydrolase domain
e2zutC1	C:3-446	TIM beta/alpha-barrel	TIM barrels	TIM barrels
e2zutC3	C:437-694	Flavodoxin-like	Class I glutamine amidotransferase-like	Class I glutamine amidotransferase-like
e2zutC2	C:695-754	Glycosyl hydrolase domain-like	Glycosyl hydrolase domain	Glycosyl hydrolase domain
e2zutD1	D:3-446	TIM beta/alpha-barrel	TIM barrels	TIM barrels
e2zutD3	D:437-694	Flavodoxin-like	Class I glutamine amidotransferase-like	Class I glutamine amidotransferase-like
e2zutD2	D:695-750	Glycosyl hydrolase domain-like	Glycosyl hydrolase domain	Glycosyl hydrolase domain

Structural contacts of domain e2zutD3 of H-group "Class I glutamine amidotransferase-like":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e2zutC1	D:x,y,z->C:X,Y,Z	TIM barrels	Interaction Interface Pymol
e2zutC3	D:x,y,z->C:X,Y,Z	Class I glutamine amidotransferase-like	Interaction Interface Pymol
e2zutA1	D:x,y,z->A:X,Y,Z	TIM barrels	Interaction Interface Pymol
e2zutC3	D:x,y,z->C:X-1,Y,Z	Class I glutamine amidotransferase-like	Interaction Interface Pymol