ECOD: domain e2zuuD1

Domain ID e2zuuD1

A: a/b three-layered sandwiches
X: Flavodoxin-like
H: Class I glutamine amidotransferase-like
T: Class I glutamine amidotransferase-like
F: LBP_M

UID:	001837879
Type:	Automatic domain
Parent:	e2zuuB1
Range:	D:437-694
Ligands:	GOL NDG
PDB:	2zuu
PDB Description:	Lacto-N-biose phosphorylase
UniProt:	E8MF13
Species:	Bifidobacterium longum

Domain
In chain context
In PDB context

Structure of domain e2zuuD1

Domains in the same chain:

Download Pymol

e2zuuD2	D:3-446	TIM beta/alpha-barrel	TIM barrels	TIM barrels
e2zuuD1	D:437-694	Flavodoxin-like	Class I glutamine amidotransferase-like	Class I glutamine amidotransferase-like
e2zuuD3	D:695-750	Glycosyl hydrolase domain-like	Glycosyl hydrolase domain	Glycosyl hydrolase domain

Domains in the same PDB:

e2zuuA3	A:3-446	TIM beta/alpha-barrel	TIM barrels	TIM barrels
e2zuuA1	A:437-694	Flavodoxin-like	Class I glutamine amidotransferase-like	Class I glutamine amidotransferase-like
e2zuuA2	A:695-754	Glycosyl hydrolase domain-like	Glycosyl hydrolase domain	Glycosyl hydrolase domain
e2zuuB3	B:8-446	TIM beta/alpha-barrel	TIM barrels	TIM barrels
e2zuuB1	B:437-690	Flavodoxin-like	Class I glutamine amidotransferase-like	Class I glutamine amidotransferase-like
e2zuuB2	B:699-748	Glycosyl hydrolase domain-like	Glycosyl hydrolase domain	Glycosyl hydrolase domain
e2zuuC2	C:3-446	TIM beta/alpha-barrel	TIM barrels	TIM barrels
e2zuuC3	C:437-694	Flavodoxin-like	Class I glutamine amidotransferase-like	Class I glutamine amidotransferase-like
e2zuuC1	C:695-754	Glycosyl hydrolase domain-like	Glycosyl hydrolase domain	Glycosyl hydrolase domain
e2zuuD2	D:3-446	TIM beta/alpha-barrel	TIM barrels	TIM barrels
e2zuuD1	D:437-694	Flavodoxin-like	Class I glutamine amidotransferase-like	Class I glutamine amidotransferase-like
e2zuuD3	D:695-750	Glycosyl hydrolase domain-like	Glycosyl hydrolase domain	Glycosyl hydrolase domain

Structural contacts of domain e2zuuD1 of H-group "Class I glutamine amidotransferase-like":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e2zuuC2	D:x,y,z->C:X,Y,Z	TIM barrels	Interaction Interface Pymol
e2zuuC3	D:x,y,z->C:X,Y,Z	Class I glutamine amidotransferase-like	Interaction Interface Pymol
e2zuuA3	D:x,y,z->A:X,Y,Z	TIM barrels	Interaction Interface Pymol