Domain ID e2zykD1

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  • A: a/b three-layered sandwiches
  • X: Periplasmic binding protein-like II
  • H: Periplasmic binding protein-like II
  • T: Periplasmic binding protein-like II
  • F: SBP_bac_8
UID: 001523402
Type: Automatic domain
Parent: e5l9pB2
Range: D:17-128,D:281-397
PDB: 2zyk
PDB Description: Solute-binding protein
UniProt: Q9AJF5
Species: Thermoactinomyces vulgaris

Structure of domain e2zykD1

Structural contacts of domain e2zykD1 of H-group "Periplasmic binding protein-like II":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2zykC1 D:x,y,z->C:X,Y,Z Periplasmic binding protein-like II Interaction Interface Pymol
e2zykC2 D:x,y,z->C:X,Y,Z Periplasmic binding protein-like II Interaction Interface Pymol
e2zykC2 D:X-1/2,Y-1/2,Z->C:x,y,z Periplasmic binding protein-like II Interaction Interface Pymol
e2zykB1 D:x,y,z->B:X,Y,Z Periplasmic binding protein-like II Interaction Interface Pymol
e2zykB1 D:x,y,z->B:X,Y-1,Z Periplasmic binding protein-like II Interaction Interface Pymol
e2zykC1 D:x,y,z->C:-X+1,Y,-Z+1 Periplasmic binding protein-like II Interaction Interface Pymol
e2zykA1 D:X-1/2,Y+1/2,Z->A:x,y,z Periplasmic binding protein-like II Interaction Interface Pymol
e2zykA2 D:X-1/2,Y+1/2,Z->A:x,y,z Periplasmic binding protein-like II Interaction Interface Pymol
e2zykA2 D:x,y,z->A:-X+1,Y,-Z+1 Periplasmic binding protein-like II Interaction Interface Pymol
e2zykA1 D:x,y,z->A:-X+1/2,Y-1/2,-Z Periplasmic binding protein-like II Interaction Interface Pymol
e2zykB1 D:x,y,z->B:-X+1/2,Y-1/2,-Z Periplasmic binding protein-like II Interaction Interface Pymol
e2zykB1 D:x,y,z->B:-X+3/2,Y-1/2,-Z+1 Periplasmic binding protein-like II Interaction Interface Pymol