Domain ID e2zzeB6

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  • A: a+b three layers
  • X: Class II aaRS and biotin synthetases
  • H: Class II aaRS and biotin synthetases
  • T: Class II aaRS and biotin synthetases
  • F: tRNA-synt_2c
UID: 001262099
Type: Automatic domain
Parent: e1riqA2
Range: B:2-267,B:307-332
Ligands: ZN
PDB: 2zze
PDB Description: Alanyl-tRNA synthetase
UniProt: O58035
Hsap BLAST neighbor: Q5JTZ9
Species: Pyrococcus horikoshii

Structure of domain e2zzeB6

Domains in the same chain:

Download Pymol

e2zzeB6 B:2-267,B:307-332 Class II aaRS and biotin synthetases Class II aaRS and biotin synthetases Class II aaRS and biotin synthetases
e2zzeB7 B:268-306,B:333-523 Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)
e2zzeB5 B:516-601 cradle loop barrel RIFT-related Alanine racemase-C
e2zzeB8 B:602-752 LuxS, MPP, ThrRS/AlaRS common domain LuxS, MPP, ThrRS/AlaRS common domain ThrRS/AlaRS editing domain

Domains in the same PDB:

e2zzeA10 A:2-267,A:307-332 Class II aaRS and biotin synthetases Class II aaRS and biotin synthetases Class II aaRS and biotin synthetases
e2zzeA11 A:268-306,A:333-523 Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)
e2zzeA9 A:516-601 cradle loop barrel RIFT-related Alanine racemase-C
e2zzeA12 A:602-752 LuxS, MPP, ThrRS/AlaRS common domain LuxS, MPP, ThrRS/AlaRS common domain ThrRS/AlaRS editing domain
e2zzeB6 B:2-267,B:307-332 Class II aaRS and biotin synthetases Class II aaRS and biotin synthetases Class II aaRS and biotin synthetases
e2zzeB7 B:268-306,B:333-523 Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)
e2zzeB5 B:516-601 cradle loop barrel RIFT-related Alanine racemase-C
e2zzeB8 B:602-752 LuxS, MPP, ThrRS/AlaRS common domain LuxS, MPP, ThrRS/AlaRS common domain ThrRS/AlaRS editing domain

Structural contacts of domain e2zzeB6 of H-group "Class II aaRS and biotin synthetases":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2zzeA12 B:-X,Y-1/2,-Z->A:x,y,z LuxS, MPP, ThrRS/AlaRS common domain Interaction Interface Pymol
e2zzeA9 B:-X+1,Y-1/2,-Z->A:x,y,z RIFT-related Interaction Interface Pymol
e2zzeA10 B:x,y,z->A:X,Y,Z Class II aaRS and biotin synthetases Interaction Interface Pymol