ECOD: domain e2zzfA4

Domain ID e2zzfA4

A: beta barrels
X: cradle loop barrel
H: RIFT-related
T: Alanine racemase-C
F: tRNA-synt_2c

UID:	001837907
Type:	Automatic domain
Parent:	e2e1bA1
Range:	A:516-601
PDB:	2zzf
PDB Description:	Alanyl-tRNA synthetase
UniProt:	O58035
Species:	Pyrococcus horikoshii

Domain
In chain context
In PDB context

Structure of domain e2zzfA4

Domains in the same chain:

Download Pymol

e2zzfA3	A:2-267,A:307-332	Class II aaRS and biotin synthetases	Class II aaRS and biotin synthetases	Class II aaRS and biotin synthetases
e2zzfA1	A:268-306,A:333-523	Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)	Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)	Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)
e2zzfA4	A:516-601	cradle loop barrel	RIFT-related	Alanine racemase-C
e2zzfA2	A:602-752	LuxS, MPP, ThrRS/AlaRS common domain	LuxS, MPP, ThrRS/AlaRS common domain	ThrRS/AlaRS editing domain

Domains in the same PDB:

e2zzfA3	A:2-267,A:307-332	Class II aaRS and biotin synthetases	Class II aaRS and biotin synthetases	Class II aaRS and biotin synthetases
e2zzfA1	A:268-306,A:333-523	Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)	Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)	Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)
e2zzfA4	A:516-601	cradle loop barrel	RIFT-related	Alanine racemase-C
e2zzfA2	A:602-752	LuxS, MPP, ThrRS/AlaRS common domain	LuxS, MPP, ThrRS/AlaRS common domain	ThrRS/AlaRS editing domain

Structural contacts of domain e2zzfA4 of H-group "RIFT-related":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e2zzfA3	A:x,y,z->A:-X,Y,-Z	Class II aaRS and biotin synthetases	Interaction Interface Pymol
e2zzfA3	A:-X,Y,-Z->A:x,y,z	Class II aaRS and biotin synthetases	Interaction Interface Pymol