Domain ID e3a0bd1

Download files:
  • A: alpha bundles
  • X: Bacterial photosystem II reaction centre L and M subunits-like
  • H: Bacterial photosystem II reaction centre L and M subunits-like
  • T: Bacterial photosystem II reaction centre L and M subunits-like
  • F: Photo_RC
UID: 000363147
Type: Automatic domain
Parent: e2j8cL1
Range: d:5013-5352
Ligands: BCR BR CLA DGD FE2 LHG MGE PHO PQ9
PDB: 3a0b
PDB Description: PHOTOSYSTEM II D2 PROTEIN
UniProt: D0VWR8
Species: Thermosynechococcus vulcanus

Structure of domain e3a0bd1

Domains in the same chain:

Download Pymol

e3a0bd1 d:5013-5352 Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like

Domains in the same PDB:

e3a0ba1 a:5010-5344 Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like
e3a0bA1 A:10-344 Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like
e3a0bb1 b:5002-5325,b:5442-5486 Photosystem II antenna protein-like Photosystem II antenna protein-like Photosystem II antenna protein-like
e3a0bb2 b:5326-5441 Photosystem II antenna protein PsbB insertion domain Photosystem II antenna protein PsbB insertion domain Photosystem II antenna protein PsbB insertion domain
e3a0bB1 B:5-328,B:445-489 Photosystem II antenna protein-like Photosystem II antenna protein-like Photosystem II antenna protein-like
e3a0bB2 B:329-444 Photosystem II antenna protein PsbB insertion domain Photosystem II antenna protein PsbB insertion domain Photosystem II antenna protein PsbB insertion domain
e3a0bc1 c:5027-5473 Photosystem II antenna protein-like Photosystem II antenna protein-like Photosystem II antenna protein-like
e3a0bC1 C:27-473 Photosystem II antenna protein-like Photosystem II antenna protein-like Photosystem II antenna protein-like
e3a0bd1 d:5013-5352 Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like
e3a0bD1 D:13-352 Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like
e3a0be1 e:5003-5084 Cytochrome b559 subunits Cytochrome b559 subunits Cytochrome b559 subunits
e3a0bE1 E:3-84 Cytochrome b559 subunits Cytochrome b559 subunits Cytochrome b559 subunits
e3a0bf1 f:5011-5045 Cytochrome b559 subunits Cytochrome b559 subunits Cytochrome b559 subunits
e3a0bF1 F:11-45 Cytochrome b559 subunits Cytochrome b559 subunits Cytochrome b559 subunits
e3a0bh1 h:5002-5065 Photosystem II 10 kDa phosphoprotein PsbH Photosystem II 10 kDa phosphoprotein PsbH Photosystem II 10 kDa phosphoprotein PsbH
e3a0bH1 H:2-65 Photosystem II 10 kDa phosphoprotein PsbH Photosystem II 10 kDa phosphoprotein PsbH Photosystem II 10 kDa phosphoprotein PsbH
e3a0bi1 i:5001-5035 Photosystem II reaction center protein I, PsbI Photosystem II reaction center protein I, PsbI Photosystem II reaction center protein I, PsbI
e3a0bI1 I:1-35 Photosystem II reaction center protein I, PsbI Photosystem II reaction center protein I, PsbI Photosystem II reaction center protein I, PsbI
e3a0bj1 j:5007-5040 Photosystem II reaction center protein J, PsbJ Photosystem II reaction center protein J, PsbJ Photosystem II reaction center protein J, PsbJ
e3a0bJ1 J:7-40 Photosystem II reaction center protein J, PsbJ Photosystem II reaction center protein J, PsbJ Photosystem II reaction center protein J, PsbJ
e3a0bk1 k:5010-5045 Photosystem II reaction center protein K, PsbK Photosystem II reaction center protein K, PsbK Photosystem II reaction center protein K, PsbK
e3a0bK1 K:10-45 Photosystem II reaction center protein K, PsbK Photosystem II reaction center protein K, PsbK Photosystem II reaction center protein K, PsbK
e3a0bl1 l:5001-5037 Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein L, PsbL
e3a0bL1 L:1-37 Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein L, PsbL
e3a0bm1 m:5001-5036 Photosystem II reaction center protein M, PsbM Photosystem II reaction center protein M, PsbM Photosystem II reaction center protein M, PsbM
e3a0bM1 M:1-36 Photosystem II reaction center protein M, PsbM Photosystem II reaction center protein M, PsbM Photosystem II reaction center protein M, PsbM
e3a0bo1 o:5030-5271 Outer membrane meander beta-barrels OMPA-like OMPA-like
e3a0bO1 O:30-271 Outer membrane meander beta-barrels OMPA-like OMPA-like
e3a0bt1 t:5001-5030 Photosystem II reaction center protein T, PsbT Photosystem II reaction center protein T, PsbT Photosystem II reaction center protein T, PsbT
e3a0bT1 T:1-30 Photosystem II reaction center protein T, PsbT Photosystem II reaction center protein T, PsbT Photosystem II reaction center protein T, PsbT
e3a0bu1 u:5037-5134 HhH/H2TH SAM/DNA-glycosylase SAM domain-like
e3a0bU1 U:37-134 HhH/H2TH SAM/DNA-glycosylase SAM domain-like
e3a0bv1 v:5027-5163 Cytochrome c-like Cytochrome c Cytochrome c
e3a0bV1 V:27-163 Cytochrome c-like Cytochrome c Cytochrome c
e3a0bx1 x:5011-5044 Photosystem II PsbX protein Photosystem II PsbX protein Photosystem II PsbX protein
e3a0bX1 X:11-44 Photosystem II PsbX protein Photosystem II PsbX protein Photosystem II PsbX protein
e3a0by1 y:5001-5028 Photosystem II reaction center protein ycf12 Photosystem II reaction center protein ycf12 Photosystem II reaction center protein ycf12
e3a0bY1 Y:19-46 Photosystem II reaction center protein ycf12 Photosystem II reaction center protein ycf12 Photosystem II reaction center protein ycf12
e3a0bz1 z:5001-5062 PsbZ-like PsbZ-like PsbZ-like
e3a0bZ1 Z:1-62 PsbZ-like PsbZ-like PsbZ-like

Structural contacts of domain e3a0bd1 of H-group "Bacterial photosystem II reaction centre L and M subunits-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3a0ba1 d:x,y,z->a:X,Y,Z Bacterial photosystem II reaction centre L and M subunits-like Interaction Interface Pymol
e3a0bb1 d:x,y,z->b:X,Y,Z Photosystem II antenna protein-like Interaction Interface Pymol
e3a0bb2 d:x,y,z->b:X,Y,Z Photosystem II antenna protein PsbB insertion domain Interaction Interface Pymol
e3a0be1 d:X,Y,Z->e:x,y,z Cytochrome b559 subunits Interaction Interface Pymol
e3a0bc1 d:x,y,z->c:X,Y,Z Photosystem II antenna protein-like Interaction Interface Pymol
e3a0bo1 d:X,Y,Z->o:x,y,z OMPA-like Interaction Interface Pymol
e3a0bf1 d:X,Y,Z->f:x,y,z Cytochrome b559 subunits Interaction Interface Pymol
e3a0bx1 d:X,Y,Z->x:x,y,z Photosystem II PsbX protein Interaction Interface Pymol
e3a0bl1 d:X,Y,Z->l:x,y,z Photosystem II reaction center protein L, PsbL Interaction Interface Pymol
e3a0bh1 d:X,Y,Z->h:x,y,z Photosystem II 10 kDa phosphoprotein PsbH Interaction Interface Pymol
e3a0bt1 d:X,Y,Z->t:x,y,z Photosystem II reaction center protein T, PsbT Interaction Interface Pymol
e3a0bv1 d:X,Y,Z->v:x,y,z Cytochrome c Interaction Interface Pymol
e3a0bm1 d:X,Y,Z->m:x,y,z Photosystem II reaction center protein M, PsbM Interaction Interface Pymol
e3a0bu1 d:X,Y,Z->u:x,y,z SAM/DNA-glycosylase Interaction Interface Pymol
e3a0bj1 d:X,Y,Z->j:x,y,z Photosystem II reaction center protein J, PsbJ Interaction Interface Pymol