Domain ID e3a0hd1

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  • A: alpha bundles
  • X: Bacterial photosystem II reaction centre L and M subunits-like
  • H: Bacterial photosystem II reaction centre L and M subunits-like
  • T: Bacterial photosystem II reaction centre L and M subunits-like
  • F: Photo_RC
UID: 000363185
Type: Automatic domain
Parent: e2j8cL1
Range: d:5013-5352
Ligands: BCR CLA DGD FE2 IOD LHG MGE PHO PQ9
PDB: 3a0h
PDB Description: PHOTOSYSTEM II D2 PROTEIN
UniProt: D0VWR8
Species: Thermosynechococcus vulcanus

Structure of domain e3a0hd1

Domains in the same chain:

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e3a0hd1 d:5013-5352 Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like

Domains in the same PDB:

e3a0ha1 a:5010-5344 Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like
e3a0hA1 A:10-344 Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like
e3a0hb1 b:5002-5328,b:5445-5489 Photosystem II antenna protein-like Photosystem II antenna protein-like Photosystem II antenna protein-like
e3a0hb2 b:5329-5444 Photosystem II antenna protein PsbB insertion domain Photosystem II antenna protein PsbB insertion domain Photosystem II antenna protein PsbB insertion domain
e3a0hB1 B:2-328,B:445-489 Photosystem II antenna protein-like Photosystem II antenna protein-like Photosystem II antenna protein-like
e3a0hB2 B:329-444 Photosystem II antenna protein PsbB insertion domain Photosystem II antenna protein PsbB insertion domain Photosystem II antenna protein PsbB insertion domain
e3a0hc1 c:5027-5473 Photosystem II antenna protein-like Photosystem II antenna protein-like Photosystem II antenna protein-like
e3a0hC1 C:27-473 Photosystem II antenna protein-like Photosystem II antenna protein-like Photosystem II antenna protein-like
e3a0hd1 d:5013-5352 Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like
e3a0hD1 D:13-352 Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like
e3a0he1 e:5003-5084 Cytochrome b559 subunits Cytochrome b559 subunits Cytochrome b559 subunits
e3a0hE1 E:3-84 Cytochrome b559 subunits Cytochrome b559 subunits Cytochrome b559 subunits
e3a0hf1 f:5011-5045 Cytochrome b559 subunits Cytochrome b559 subunits Cytochrome b559 subunits
e3a0hF1 F:11-45 Cytochrome b559 subunits Cytochrome b559 subunits Cytochrome b559 subunits
e3a0hh1 h:5002-5065 Photosystem II 10 kDa phosphoprotein PsbH Photosystem II 10 kDa phosphoprotein PsbH Photosystem II 10 kDa phosphoprotein PsbH
e3a0hH1 H:2-65 Photosystem II 10 kDa phosphoprotein PsbH Photosystem II 10 kDa phosphoprotein PsbH Photosystem II 10 kDa phosphoprotein PsbH
e3a0hi1 i:5001-5035 Photosystem II reaction center protein I, PsbI Photosystem II reaction center protein I, PsbI Photosystem II reaction center protein I, PsbI
e3a0hI1 I:1-35 Photosystem II reaction center protein I, PsbI Photosystem II reaction center protein I, PsbI Photosystem II reaction center protein I, PsbI
e3a0hj1 j:5007-5040 Photosystem II reaction center protein J, PsbJ Photosystem II reaction center protein J, PsbJ Photosystem II reaction center protein J, PsbJ
e3a0hJ1 J:7-40 Photosystem II reaction center protein J, PsbJ Photosystem II reaction center protein J, PsbJ Photosystem II reaction center protein J, PsbJ
e3a0hk1 k:5010-5045 Photosystem II reaction center protein K, PsbK Photosystem II reaction center protein K, PsbK Photosystem II reaction center protein K, PsbK
e3a0hK1 K:10-45 Photosystem II reaction center protein K, PsbK Photosystem II reaction center protein K, PsbK Photosystem II reaction center protein K, PsbK
e3a0hl1 l:5001-5037 Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein L, PsbL
e3a0hL1 L:1-37 Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein L, PsbL
e3a0hm1 m:5001-5036 Photosystem II reaction center protein M, PsbM Photosystem II reaction center protein M, PsbM Photosystem II reaction center protein M, PsbM
e3a0hM1 M:1-36 Photosystem II reaction center protein M, PsbM Photosystem II reaction center protein M, PsbM Photosystem II reaction center protein M, PsbM
e3a0ho1 o:5030-5271 Outer membrane meander beta-barrels OMPA-like OMPA-like
e3a0hO1 O:30-271 Outer membrane meander beta-barrels OMPA-like OMPA-like
e3a0ht1 t:5001-5030 Photosystem II reaction center protein T, PsbT Photosystem II reaction center protein T, PsbT Photosystem II reaction center protein T, PsbT
e3a0hT1 T:1-30 Photosystem II reaction center protein T, PsbT Photosystem II reaction center protein T, PsbT Photosystem II reaction center protein T, PsbT
e3a0hu1 u:5007-5104 HhH/H2TH SAM/DNA-glycosylase SAM domain-like
e3a0hU1 U:7-104 HhH/H2TH SAM/DNA-glycosylase SAM domain-like
e3a0hv1 v:5027-5163 Cytochrome c-like Cytochrome c Cytochrome c
e3a0hV1 V:27-163 Cytochrome c-like Cytochrome c Cytochrome c
e3a0hx1 x:5011-5044 Photosystem II PsbX protein Photosystem II PsbX protein Photosystem II PsbX protein
e3a0hX1 X:11-44 Photosystem II PsbX protein Photosystem II PsbX protein Photosystem II PsbX protein
e3a0hy1 y:5019-5046 Photosystem II reaction center protein ycf12 Photosystem II reaction center protein ycf12 Photosystem II reaction center protein ycf12
e3a0hY1 Y:19-46 Photosystem II reaction center protein ycf12 Photosystem II reaction center protein ycf12 Photosystem II reaction center protein ycf12
e3a0hz1 z:5001-5062 PsbZ-like PsbZ-like PsbZ-like
e3a0hZ1 Z:1-62 PsbZ-like PsbZ-like PsbZ-like

Structural contacts of domain e3a0hd1 of H-group "Bacterial photosystem II reaction centre L and M subunits-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3a0ha1 d:x,y,z->a:X,Y,Z Bacterial photosystem II reaction centre L and M subunits-like Interaction Interface Pymol
e3a0hb1 d:x,y,z->b:X,Y,Z Photosystem II antenna protein-like Interaction Interface Pymol
e3a0hb2 d:x,y,z->b:X,Y,Z Photosystem II antenna protein PsbB insertion domain Interaction Interface Pymol
e3a0he1 d:X,Y,Z->e:x,y,z Cytochrome b559 subunits Interaction Interface Pymol
e3a0hc1 d:x,y,z->c:X,Y,Z Photosystem II antenna protein-like Interaction Interface Pymol
e3a0ho1 d:X,Y,Z->o:x,y,z OMPA-like Interaction Interface Pymol
e3a0hx1 d:X,Y,Z->x:x,y,z Photosystem II PsbX protein Interaction Interface Pymol
e3a0hf1 d:X,Y,Z->f:x,y,z Cytochrome b559 subunits Interaction Interface Pymol
e3a0hl1 d:X,Y,Z->l:x,y,z Photosystem II reaction center protein L, PsbL Interaction Interface Pymol
e3a0hh1 d:X,Y,Z->h:x,y,z Photosystem II 10 kDa phosphoprotein PsbH Interaction Interface Pymol
e3a0hv1 d:X,Y,Z->v:x,y,z Cytochrome c Interaction Interface Pymol
e3a0ht1 d:X,Y,Z->t:x,y,z Photosystem II reaction center protein T, PsbT Interaction Interface Pymol
e3a0hm1 d:X,Y,Z->m:x,y,z Photosystem II reaction center protein M, PsbM Interaction Interface Pymol
e3a0hu1 d:X,Y,Z->u:x,y,z SAM/DNA-glycosylase Interaction Interface Pymol
e3a0hj1 d:X,Y,Z->j:x,y,z Photosystem II reaction center protein J, PsbJ Interaction Interface Pymol