Domain ID e3abkA1

Download files:
  • A: alpha superhelices
  • X: Cytochrome c oxidase subunit I-like
  • H: Cytochrome c oxidase subunit I-like
  • T: Cytochrome c oxidase subunit I-like
  • F: COX1
UID: 000385997
Type: Automatic domain
Parent: e1v54A1
Range: A:1-514
Ligands: CDL CHD CU DMU HEA MG NA NO PEK PGV PSC TGL
PDB: 3abk
PDB Description: CYTOCHROME C OXIDASE SUBUNIT 1
UniProt: P00396
Hsap BLAST neighbor: P00395
Species: Bos taurus

Structure of domain e3abkA1

Domains in the same chain:

e3abkA1 A:1-514 Cytochrome c oxidase subunit I-like Cytochrome c oxidase subunit I-like Cytochrome c oxidase subunit I-like

Domains in the same PDB:

e3abkA1 A:1-514 Cytochrome c oxidase subunit I-like Cytochrome c oxidase subunit I-like Cytochrome c oxidase subunit I-like
e3abkB1 B:1-90 Cytochrome c oxidase subunit II-like, transmembrane region Cytochrome c oxidase subunit II-like, transmembrane region Cytochrome c oxidase subunit II-like, transmembrane region
e3abkB2 B:91-227 Cupredoxin-like Cupredoxin-related Cupredoxin-related
e3abkC1 C:3-261 Cytochrome c oxidase subunit III-like Cytochrome c oxidase subunit III-like Cytochrome c oxidase subunit III-like
e3abkD1 D:4-147 Mitochondrial cytochrome c oxidase subunit IV Mitochondrial cytochrome c oxidase subunit IV Mitochondrial cytochrome c oxidase subunit IV
e3abkE1 E:5-109 Repetitive alpha hairpins Cytochrome c oxidase subunit E Cytochrome c oxidase subunit E
e3abkF1 F:1-98 Rubredoxin-like Rubredoxin-related Cytochrome c oxidase Subunit F
e3abkG1 G:1-84 Mitochondrial cytochrome c oxidase subunit VIa Mitochondrial cytochrome c oxidase subunit VIa Mitochondrial cytochrome c oxidase subunit VIa
e3abkH1 H:7-85 Cytochrome c oxidase subunit h Cytochrome c oxidase subunit h Cytochrome c oxidase subunit h
e3abkI1 I:1-73 Mitochondrial cytochrome c oxidase subunit VIc Mitochondrial cytochrome c oxidase subunit VIc Mitochondrial cytochrome c oxidase subunit VIc
e3abkJ1 J:1-58 Mitochondrial cytochrome c oxidase subunit VIIa Mitochondrial cytochrome c oxidase subunit VIIa Mitochondrial cytochrome c oxidase subunit VIIa
e3abkK1 K:6-54 Mitochondrial cytochrome c oxidase subunit VIIb Mitochondrial cytochrome c oxidase subunit VIIb Mitochondrial cytochrome c oxidase subunit VIIb
e3abkL1 L:2-47 Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa) Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa) Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa)
e3abkM1 M:1-43 Mitochondrial cytochrome c oxidase subunit VIIIb (aka IX) Mitochondrial cytochrome c oxidase subunit VIIIb (aka IX) Mitochondrial cytochrome c oxidase subunit VIIIb (aka IX)
e3abkN1 N:1-514 Cytochrome c oxidase subunit I-like Cytochrome c oxidase subunit I-like Cytochrome c oxidase subunit I-like
e3abkO1 O:1-90 Cytochrome c oxidase subunit II-like, transmembrane region Cytochrome c oxidase subunit II-like, transmembrane region Cytochrome c oxidase subunit II-like, transmembrane region
e3abkO2 O:91-227 Cupredoxin-like Cupredoxin-related Cupredoxin-related
e3abkP1 P:3-261 Cytochrome c oxidase subunit III-like Cytochrome c oxidase subunit III-like Cytochrome c oxidase subunit III-like
e3abkQ1 Q:4-147 Mitochondrial cytochrome c oxidase subunit IV Mitochondrial cytochrome c oxidase subunit IV Mitochondrial cytochrome c oxidase subunit IV
e3abkR1 R:5-109 Repetitive alpha hairpins Cytochrome c oxidase subunit E Cytochrome c oxidase subunit E
e3abkS1 S:1-98 Rubredoxin-like Rubredoxin-related Cytochrome c oxidase Subunit F
e3abkT1 T:1-84 Mitochondrial cytochrome c oxidase subunit VIa Mitochondrial cytochrome c oxidase subunit VIa Mitochondrial cytochrome c oxidase subunit VIa
e3abkU1 U:7-85 Cytochrome c oxidase subunit h Cytochrome c oxidase subunit h Cytochrome c oxidase subunit h
e3abkV1 V:1-73 Mitochondrial cytochrome c oxidase subunit VIc Mitochondrial cytochrome c oxidase subunit VIc Mitochondrial cytochrome c oxidase subunit VIc
e3abkW1 W:1-58 Mitochondrial cytochrome c oxidase subunit VIIa Mitochondrial cytochrome c oxidase subunit VIIa Mitochondrial cytochrome c oxidase subunit VIIa
e3abkX1 X:6-54 Mitochondrial cytochrome c oxidase subunit VIIb Mitochondrial cytochrome c oxidase subunit VIIb Mitochondrial cytochrome c oxidase subunit VIIb
e3abkY1 Y:2-47 Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa) Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa) Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa)
e3abkZ1 Z:1-43 Mitochondrial cytochrome c oxidase subunit VIIIb (aka IX) Mitochondrial cytochrome c oxidase subunit VIIIb (aka IX) Mitochondrial cytochrome c oxidase subunit VIIIb (aka IX)

Structural contacts of domain e3abkA1 of H-group "Cytochrome c oxidase subunit I-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3abkB1 A:X,Y,Z->B:x,y,z Cytochrome c oxidase subunit II-like, transmembrane region Interaction Interface Pymol
e3abkB2 A:X,Y,Z->B:x,y,z Cupredoxin-related Interaction Interface Pymol
e3abkC1 A:X,Y,Z->C:x,y,z Cytochrome c oxidase subunit III-like Interaction Interface Pymol
e3abkL1 A:X,Y,Z->L:x,y,z Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa) Interaction Interface Pymol
e3abkD1 A:X,Y,Z->D:x,y,z Mitochondrial cytochrome c oxidase subunit IV Interaction Interface Pymol
e3abkF1 A:X,Y,Z->F:x,y,z Rubredoxin-related Interaction Interface Pymol
e3abkM1 A:X,Y,Z->M:x,y,z Mitochondrial cytochrome c oxidase subunit VIIIb (aka IX) Interaction Interface Pymol
e3abkT1 A:X,Y,Z->T:x,y,z Mitochondrial cytochrome c oxidase subunit VIa Interaction Interface Pymol
e3abkG1 A:X,Y,Z->G:x,y,z Mitochondrial cytochrome c oxidase subunit VIa Interaction Interface Pymol
e3abkK1 A:X,Y,Z->K:x,y,z Mitochondrial cytochrome c oxidase subunit VIIb Interaction Interface Pymol
e3abkJ1 A:X,Y,Z->J:x,y,z Mitochondrial cytochrome c oxidase subunit VIIa Interaction Interface Pymol
e3abkH1 A:X,Y,Z->H:x,y,z Cytochrome c oxidase subunit h Interaction Interface Pymol
e3abkI1 A:X,Y,Z->I:x,y,z Mitochondrial cytochrome c oxidase subunit VIc Interaction Interface Pymol