ECOD: domain e3abmR1

Domain ID e3abmR1

A: alpha superhelices
X: Repetitive alpha hairpins
H: Cytochrome c oxidase subunit E
T: Cytochrome c oxidase subunit E
F: COX5A

UID:	000381483
Type:	Automatic domain
Parent:	e1v54E1
Range:	R:6-109
Ligands:	PSC
PDB:	3abm
PDB Description:	CYTOCHROME C OXIDASE SUBUNIT 5A
UniProt:	P00426
Hsap BLAST neighbor:	P20674
Species:	Bos taurus

Domain
In chain context
In PDB context

Structure of domain e3abmR1

Domains in the same chain:

Download Pymol

e3abmR1	R:6-109	Repetitive alpha hairpins	Cytochrome c oxidase subunit E	Cytochrome c oxidase subunit E

Domains in the same PDB:

Structural contacts of domain e3abmR1 of H-group "Cytochrome c oxidase subunit E":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e3abmQ1	R:x,y,z->Q:X,Y,Z	Mitochondrial cytochrome c oxidase subunit IV	Interaction Interface Pymol
e3abmV1	R:X,Y,Z->V:x,y,z	Mitochondrial cytochrome c oxidase subunit VIc	Interaction Interface Pymol
e3abmO1	R:x,y,z->O:X,Y,Z	Cytochrome c oxidase subunit II-like, transmembrane region	Interaction Interface Pymol
e3abmS1	R:X,Y,Z->S:x,y,z	Rubredoxin-related	Interaction Interface Pymol

e3abmA1	A:1-514	Cytochrome c oxidase subunit I-like	Cytochrome c oxidase subunit I-like	Cytochrome c oxidase subunit I-like
e3abmB1	B:1-90	Cytochrome c oxidase subunit II-like, transmembrane region	Cytochrome c oxidase subunit II-like, transmembrane region	Cytochrome c oxidase subunit II-like, transmembrane region
e3abmB2	B:91-227	Cupredoxin-like	Cupredoxin-related	Cupredoxin-related
e3abmC1	C:3-261	Cytochrome c oxidase subunit III-like	Cytochrome c oxidase subunit III-like	Cytochrome c oxidase subunit III-like
e3abmD1	D:4-147	Mitochondrial cytochrome c oxidase subunit IV	Mitochondrial cytochrome c oxidase subunit IV	Mitochondrial cytochrome c oxidase subunit IV
e3abmE1	E:6-109	Repetitive alpha hairpins	Cytochrome c oxidase subunit E	Cytochrome c oxidase subunit E
e3abmF1	F:4-96	Rubredoxin-like	Rubredoxin-related	Cytochrome c oxidase Subunit F
e3abmG1	G:1-84	Mitochondrial cytochrome c oxidase subunit VIa	Mitochondrial cytochrome c oxidase subunit VIa	Mitochondrial cytochrome c oxidase subunit VIa
e3abmH1	H:11-85	Cytochrome c oxidase subunit h	Cytochrome c oxidase subunit h	Cytochrome c oxidase subunit h
e3abmI1	I:3-73	Mitochondrial cytochrome c oxidase subunit VIc	Mitochondrial cytochrome c oxidase subunit VIc	Mitochondrial cytochrome c oxidase subunit VIc
e3abmJ1	J:1-57	Mitochondrial cytochrome c oxidase subunit VIIa	Mitochondrial cytochrome c oxidase subunit VIIa	Mitochondrial cytochrome c oxidase subunit VIIa
e3abmK1	K:6-54	Mitochondrial cytochrome c oxidase subunit VIIb	Mitochondrial cytochrome c oxidase subunit VIIb	Mitochondrial cytochrome c oxidase subunit VIIb
e3abmL1	L:2-47	Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa)	Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa)	Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa)
e3abmM1	M:1-43	Mitochondrial cytochrome c oxidase subunit VIIIb (aka IX)	Mitochondrial cytochrome c oxidase subunit VIIIb (aka IX)	Mitochondrial cytochrome c oxidase subunit VIIIb (aka IX)
e3abmN1	N:1-514	Cytochrome c oxidase subunit I-like	Cytochrome c oxidase subunit I-like	Cytochrome c oxidase subunit I-like
e3abmO1	O:1-90	Cytochrome c oxidase subunit II-like, transmembrane region	Cytochrome c oxidase subunit II-like, transmembrane region	Cytochrome c oxidase subunit II-like, transmembrane region
e3abmO2	O:91-227	Cupredoxin-like	Cupredoxin-related	Cupredoxin-related
e3abmP1	P:3-261	Cytochrome c oxidase subunit III-like	Cytochrome c oxidase subunit III-like	Cytochrome c oxidase subunit III-like
e3abmQ1	Q:4-147	Mitochondrial cytochrome c oxidase subunit IV	Mitochondrial cytochrome c oxidase subunit IV	Mitochondrial cytochrome c oxidase subunit IV
e3abmR1	R:6-109	Repetitive alpha hairpins	Cytochrome c oxidase subunit E	Cytochrome c oxidase subunit E
e3abmS1	S:4-96	Rubredoxin-like	Rubredoxin-related	Cytochrome c oxidase Subunit F
e3abmT1	T:1-84	Mitochondrial cytochrome c oxidase subunit VIa	Mitochondrial cytochrome c oxidase subunit VIa	Mitochondrial cytochrome c oxidase subunit VIa
e3abmU1	U:11-85	Cytochrome c oxidase subunit h	Cytochrome c oxidase subunit h	Cytochrome c oxidase subunit h
e3abmV1	V:3-73	Mitochondrial cytochrome c oxidase subunit VIc	Mitochondrial cytochrome c oxidase subunit VIc	Mitochondrial cytochrome c oxidase subunit VIc
e3abmW1	W:1-57	Mitochondrial cytochrome c oxidase subunit VIIa	Mitochondrial cytochrome c oxidase subunit VIIa	Mitochondrial cytochrome c oxidase subunit VIIa
e3abmX1	X:6-54	Mitochondrial cytochrome c oxidase subunit VIIb	Mitochondrial cytochrome c oxidase subunit VIIb	Mitochondrial cytochrome c oxidase subunit VIIb
e3abmY1	Y:2-47	Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa)	Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa)	Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa)
e3abmZ1	Z:1-43	Mitochondrial cytochrome c oxidase subunit VIIIb (aka IX)	Mitochondrial cytochrome c oxidase subunit VIIIb (aka IX)	Mitochondrial cytochrome c oxidase subunit VIIIb (aka IX)