ECOD: domain e3ad9B1

Domain ID e3ad9B1

A: a/b three-layered sandwiches
X: Rossmann-like
H: Rossmann-related
T: FAD/NAD(P)-binding domain
F: DAO

UID:	001390221
Type:	Automatic domain
Parent:	e3atqA1
Range:	B:1-241,B:331-397
Ligands:	FAD FMN SO4
PDB:	3ad9
PDB Description:	SARCOSINE OXIDASE BETA SUBUNIT
UniProt:	Q50LF2
Hsap BLAST neighbor:	Q9UL12
Species:	Corynebacterium sp. U-96

Domain
In chain context
In PDB context

Structure of domain e3ad9B1

Domains in the same chain:

Download Pymol

e3ad9B1	B:1-241,B:331-397	Rossmann-like	Rossmann-related	FAD/NAD(P)-binding domain
e3ad9B2	B:242-332	FAD-linked reductases, C-terminal domain-like	FAD-linked reductases-C	FAD-linked reductases-C

Domains in the same PDB:

e3ad9A5	A:1-127	beta-Grasp	Ubiquitin-related	Ubiquitin-like
e3ad9A6	A:128-480	Rossmann-like	Rossmann-related	Nucleotide-binding domain
e3ad9A4	A:481-537	HTH	bacterioferritin-associated ferredoxin	bacterioferritin-associated ferredoxin
e3ad9A8	A:556-723	Alpha-beta plaits	Aminomethyltransferase folate-binding domain	Aminomethyltransferase folate-binding domain
e3ad9A7	A:724-863	Alpha-beta plaits	Aminomethyltransferase folate-binding domain	Aminomethyltransferase folate-binding domain
e3ad9A3	A:865-963	cradle loop barrel	RIFT-related	Aminomethyltransferase beta-barrel domain
e3ad9B1	B:1-241,B:331-397	Rossmann-like	Rossmann-related	FAD/NAD(P)-binding domain
e3ad9B2	B:242-332	FAD-linked reductases, C-terminal domain-like	FAD-linked reductases-C	FAD-linked reductases-C
e3ad9C1	C:6-200	Alpha-beta plaits	Aminomethyltransferase folate-binding domain	Aminomethyltransferase folate-binding domain
e3ad9D1	D:1-91	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related

Structural contacts of domain e3ad9B1 of H-group "Rossmann-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e3atqA1	B:x,y,z->A:X,Y,Z	Rossmann-related	Interaction Interface Pymol
e3ad9A5	B:x,y,z->A:X,Y,Z	Ubiquitin-related	Interaction Interface Pymol
e3ad9A3	B:x,y,z->A:X,Y,Z	RIFT-related	Interaction Interface Pymol
e3ad9A4	B:x,y,z->A:X,Y,Z	bacterioferritin-associated ferredoxin	Interaction Interface Pymol
e3ad9D1	B:X,Y,Z->D:x,y,z	Rubredoxin-related	Interaction Interface Pymol
e3ad9D1	B:X-Y,X,Z-1/6->A:x,y,z	Rubredoxin-related	Interaction Interface Pymol
e3ad9D1	B:x,y,z->A:-X,-X+Y,-Z+1/3	Rubredoxin-related	Interaction Interface Pymol
e3ad9C1	B:X-Y,X,Z-1/6->C:x,y,z	Aminomethyltransferase folate-binding domain	Interaction Interface Pymol
e3ad9B1	B:x,y,z->B:-X,-X+Y,-Z+1/3	Rossmann-related	Interaction Interface Pymol
e3ad9B1	B:-X,-X+Y,-Z+1/3->B:x,y,z	Rossmann-related	Interaction Interface Pymol
e3ad9B1	B:x,y,z->B:-Y+1,-X+1,-Z+1/6	Rossmann-related	Interaction Interface Pymol
e3ad9B1	B:-Y+1,-X+1,-Z+1/6->B:x,y,z	Rossmann-related	Interaction Interface Pymol