Domain ID e3aedA4

Download files:
  • A: a/b three-layered sandwiches
  • X: Rossmann-like
  • H: Rossmann-related
  • T: FAD/NAD(P)-binding domain
  • F: FAD_binding_2
UID: 001270055
Type: Automatic domain
Parent: e2bs2A3
Range: A:10-247,A:368-462
Ligands: FAD MLI
PDB: 3aed
PDB Description: Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial
UniProt: Q0QF01
Hsap BLAST neighbor: P31040
Species: Sus scrofa

Structure of domain e3aedA4

Domains in the same chain:

e3aedA4 A:10-247,A:368-462 Rossmann-like Rossmann-related FAD/NAD(P)-binding domain
e3aedA1 A:248-367 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
e3aedA5 A:463-622 Spectrin repeat-like Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain

Domains in the same PDB:

e3aedA4 A:10-247,A:368-462 Rossmann-like Rossmann-related FAD/NAD(P)-binding domain
e3aedA1 A:248-367 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
e3aedA5 A:463-622 Spectrin repeat-like Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
e3aedB2 B:9-114 beta-Grasp Ubiquitin-related Ubiquitin-like
e3aedB1 B:115-247 alpha-helical ferredoxin-like alpha-helical ferredoxin alpha-helical ferredoxin
e3aedC1 C:6-143 Transmembrane heme-binding four-helical bundle Transmembrane heme-binding four-helical bundle Fumarate reductase respiratory complex transmembrane subunits
e3aedD1 D:35-136 Transmembrane heme-binding four-helical bundle Transmembrane heme-binding four-helical bundle Fumarate reductase respiratory complex transmembrane subunits

Structural contacts of domain e3aedA4 of H-group "Rossmann-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3aedB2 A:X,Y,Z->B:x,y,z Ubiquitin-related Interaction Interface Pymol
e3aedB1 A:X,Y,Z->B:x,y,z alpha-helical ferredoxin Interaction Interface Pymol
e3aedA4 A:x,y,z->A:X-1/2,-Y-1/2,-Z Rossmann-related Interaction Interface Pymol
e3aedA5 A:X-1/2,-Y-1/2,-Z->A:x,y,z Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain Interaction Interface Pymol
e3aedA4 A:X-1/2,-Y-1/2,-Z->A:x,y,z Rossmann-related Interaction Interface Pymol
e3aedB1 A:X-1/2,-Y-1/2,-Z->B:x,y,z alpha-helical ferredoxin Interaction Interface Pymol
e3aedC1 A:X,Y,Z->C:x,y,z Transmembrane heme-binding four-helical bundle Interaction Interface Pymol