Domain ID e3afcA1

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  • A: beta duplicates or obligate multimers
  • X: beta-propeller-like
  • H: beta-propeller
  • T: 7-bladed
  • F: Sema
UID: 000401889
Type: Automatic domain
Parent: e1q47A1
Range: A:19-513
Ligands: NAG
PDB: 3afc
PDB Description: SEMAPHORIN-6A
UniProt: O35464
Hsap BLAST neighbor: Q9H2E6
Species: Mus musculus

Structure of domain e3afcA1

Structural contacts of domain e3afcA1 of H-group "beta-propeller":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3afcB1 A:X,Y,Z->B:x,y,z beta-propeller Interaction Interface Pymol
e3afcA1 A:x,y,z->A:-X+1,Y-1/2,-Z+1 beta-propeller Interaction Interface Pymol
e3afcA1 A:-X+1,Y-1/2,-Z+1->A:x,y,z beta-propeller Interaction Interface Pymol
e3afcA2 A:-X+1,Y-1/2,-Z+1->A:x,y,z Trefoil/Plexin domain-like Interaction Interface Pymol
e3afcB1 A:x,y,z->B:-X,Y-1/2,-Z beta-propeller Interaction Interface Pymol
e3afcB1 A:x,y,z->B:-X+1,Y-1/2,-Z beta-propeller Interaction Interface Pymol
e3afcA2 A:-X,Y-1/2,-Z+1->A:x,y,z Trefoil/Plexin domain-like Interaction Interface Pymol
e3afcB1 A:X-1,Y,Z->B:x,y,z beta-propeller Interaction Interface Pymol
e3afcB1 A:X-1,Y,Z-1->B:x,y,z beta-propeller Interaction Interface Pymol
e3afcA2 A:X-1,Y,Z->A:x,y,z Trefoil/Plexin domain-like Interaction Interface Pymol
e3afcB1 A:x,y,z->B:-X,Y-1/2,-Z+1 beta-propeller Interaction Interface Pymol