ECOD: domain e3afgB2

Domain ID e3afgB2

A: beta sandwiches
X: jelly-roll
H: Galactose-binding domain-like
T: Galactose-binding domain-like
F: PPC

UID:	000396747
Type:	Automatic domain
Parent:	e1wmdA1
Range:	B:419-522
Ligands:	CA
PDB:	3afg
PDB Description:	Subtilisin-like serine protease
UniProt:	Q5JIZ5
Species:	Thermococcus kodakarensis

Domain
In chain context
In PDB context

Structure of domain e3afgB2

Domains in the same chain:

Download Pymol

e3afgB7	B:4-112	Alpha-beta plaits	Protease propeptides/inhibitors	Protease propeptides/inhibitors
e3afgB6	B:113-418	Subtilisin-like	Subtilisin-like	Subtilisin-like
e3afgB2	B:419-522	jelly-roll	Galactose-binding domain-like	Galactose-binding domain-like

Domains in the same PDB:

Structural contacts of domain e3afgB2 of H-group "Galactose-binding domain-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e3afgA2	B:x,y,z->A:-X,Y-1/2,-Z-1/2	Galactose-binding domain-like	Interaction Interface Pymol

e3afgA7	A:4-112	Alpha-beta plaits	Protease propeptides/inhibitors	Protease propeptides/inhibitors
e3afgA6	A:124-418	Subtilisin-like	Subtilisin-like	Subtilisin-like
e3afgA2	A:419-522	jelly-roll	Galactose-binding domain-like	Galactose-binding domain-like
e3afgB7	B:4-112	Alpha-beta plaits	Protease propeptides/inhibitors	Protease propeptides/inhibitors
e3afgB6	B:113-418	Subtilisin-like	Subtilisin-like	Subtilisin-like
e3afgB2	B:419-522	jelly-roll	Galactose-binding domain-like	Galactose-binding domain-like