Domain ID e3ag1B2

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  • A: beta sandwiches
  • X: Cupredoxin-like
  • H: Cupredoxin-related
  • T: Cupredoxin-related
  • F: COX2
UID: 000389474
Type: Automatic domain
Parent: e1v54B1
Range: B:91-227
Ligands: CUA MG
PDB: 3ag1
PDB Description: CYTOCHROME C OXIDASE SUBUNIT 2
UniProt: P68530
Hsap BLAST neighbor: P00403
Species: Bos taurus

Structure of domain e3ag1B2

Domains in the same chain:

e3ag1B1 B:1-90 Cytochrome c oxidase subunit II-like, transmembrane region Cytochrome c oxidase subunit II-like, transmembrane region Cytochrome c oxidase subunit II-like, transmembrane region
e3ag1B2 B:91-227 Cupredoxin-like Cupredoxin-related Cupredoxin-related

Domains in the same PDB:

e3ag1A1 A:1-514 Cytochrome c oxidase subunit I-like Cytochrome c oxidase subunit I-like Cytochrome c oxidase subunit I-like
e3ag1B1 B:1-90 Cytochrome c oxidase subunit II-like, transmembrane region Cytochrome c oxidase subunit II-like, transmembrane region Cytochrome c oxidase subunit II-like, transmembrane region
e3ag1B2 B:91-227 Cupredoxin-like Cupredoxin-related Cupredoxin-related
e3ag1C1 C:3-261 Cytochrome c oxidase subunit III-like Cytochrome c oxidase subunit III-like Cytochrome c oxidase subunit III-like
e3ag1D1 D:4-147 Mitochondrial cytochrome c oxidase subunit IV Mitochondrial cytochrome c oxidase subunit IV Mitochondrial cytochrome c oxidase subunit IV
e3ag1E1 E:5-109 Repetitive alpha hairpins Cytochrome c oxidase subunit E Cytochrome c oxidase subunit E
e3ag1F1 F:1-98 Rubredoxin-like Rubredoxin-related Cytochrome c oxidase Subunit F
e3ag1G1 G:1-84 Mitochondrial cytochrome c oxidase subunit VIa Mitochondrial cytochrome c oxidase subunit VIa Mitochondrial cytochrome c oxidase subunit VIa
e3ag1H1 H:7-85 Cytochrome c oxidase subunit h Cytochrome c oxidase subunit h Cytochrome c oxidase subunit h
e3ag1I1 I:1-73 Mitochondrial cytochrome c oxidase subunit VIc Mitochondrial cytochrome c oxidase subunit VIc Mitochondrial cytochrome c oxidase subunit VIc
e3ag1J1 J:1-58 Mitochondrial cytochrome c oxidase subunit VIIa Mitochondrial cytochrome c oxidase subunit VIIa Mitochondrial cytochrome c oxidase subunit VIIa
e3ag1K1 K:6-54 Mitochondrial cytochrome c oxidase subunit VIIb Mitochondrial cytochrome c oxidase subunit VIIb Mitochondrial cytochrome c oxidase subunit VIIb
e3ag1L1 L:2-47 Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa) Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa) Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa)
e3ag1M1 M:1-43 Mitochondrial cytochrome c oxidase subunit VIIIb (aka IX) Mitochondrial cytochrome c oxidase subunit VIIIb (aka IX) Mitochondrial cytochrome c oxidase subunit VIIIb (aka IX)
e3ag1N1 N:1-514 Cytochrome c oxidase subunit I-like Cytochrome c oxidase subunit I-like Cytochrome c oxidase subunit I-like
e3ag1O1 O:1-90 Cytochrome c oxidase subunit II-like, transmembrane region Cytochrome c oxidase subunit II-like, transmembrane region Cytochrome c oxidase subunit II-like, transmembrane region
e3ag1O2 O:91-227 Cupredoxin-like Cupredoxin-related Cupredoxin-related
e3ag1P1 P:3-261 Cytochrome c oxidase subunit III-like Cytochrome c oxidase subunit III-like Cytochrome c oxidase subunit III-like
e3ag1Q1 Q:4-147 Mitochondrial cytochrome c oxidase subunit IV Mitochondrial cytochrome c oxidase subunit IV Mitochondrial cytochrome c oxidase subunit IV
e3ag1R1 R:5-109 Repetitive alpha hairpins Cytochrome c oxidase subunit E Cytochrome c oxidase subunit E
e3ag1S1 S:1-98 Rubredoxin-like Rubredoxin-related Cytochrome c oxidase Subunit F
e3ag1T1 T:1-84 Mitochondrial cytochrome c oxidase subunit VIa Mitochondrial cytochrome c oxidase subunit VIa Mitochondrial cytochrome c oxidase subunit VIa
e3ag1U1 U:7-85 Cytochrome c oxidase subunit h Cytochrome c oxidase subunit h Cytochrome c oxidase subunit h
e3ag1V1 V:1-73 Mitochondrial cytochrome c oxidase subunit VIc Mitochondrial cytochrome c oxidase subunit VIc Mitochondrial cytochrome c oxidase subunit VIc
e3ag1W1 W:1-58 Mitochondrial cytochrome c oxidase subunit VIIa Mitochondrial cytochrome c oxidase subunit VIIa Mitochondrial cytochrome c oxidase subunit VIIa
e3ag1X1 X:6-54 Mitochondrial cytochrome c oxidase subunit VIIb Mitochondrial cytochrome c oxidase subunit VIIb Mitochondrial cytochrome c oxidase subunit VIIb
e3ag1Y1 Y:2-47 Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa) Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa) Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa)
e3ag1Z1 Z:1-43 Mitochondrial cytochrome c oxidase subunit VIIIb (aka IX) Mitochondrial cytochrome c oxidase subunit VIIIb (aka IX) Mitochondrial cytochrome c oxidase subunit VIIIb (aka IX)

Structural contacts of domain e3ag1B2 of H-group "Cupredoxin-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3ag1A1 B:x,y,z->A:X,Y,Z Cytochrome c oxidase subunit I-like Interaction Interface Pymol
e3ag1I1 B:X,Y,Z->I:x,y,z Mitochondrial cytochrome c oxidase subunit VIc Interaction Interface Pymol
e3ag1H1 B:X,Y,Z->H:x,y,z Cytochrome c oxidase subunit h Interaction Interface Pymol
e3ag1D1 B:X,Y,Z->D:x,y,z Mitochondrial cytochrome c oxidase subunit IV Interaction Interface Pymol
e3ag1D1 B:x,y,z->D:-X+1/2,-Y+3,Z-1/2 Mitochondrial cytochrome c oxidase subunit IV Interaction Interface Pymol
e3ag1M1 B:x,y,z->M:-X+1/2,-Y+3,Z-1/2 Mitochondrial cytochrome c oxidase subunit VIIIb (aka IX) Interaction Interface Pymol
e3ag1K1 B:X,Y,Z->K:x,y,z Mitochondrial cytochrome c oxidase subunit VIIb Interaction Interface Pymol
e3ag1F1 B:x,y,z->F:-X+1/2,-Y+3,Z-1/2 Rubredoxin-related Interaction Interface Pymol
e3ag1L1 B:x,y,z->L:-X+1/2,-Y+3,Z-1/2 Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa) Interaction Interface Pymol