Domain ID e3ag2D1

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  • A: extended segments
  • X: Mitochondrial cytochrome c oxidase subunit IV
  • H: Mitochondrial cytochrome c oxidase subunit IV
  • T: Mitochondrial cytochrome c oxidase subunit IV
  • F: COX4
UID: 000389507
Type: Automatic domain
Parent: e1v54D1
Range: D:4-147
Ligands: DMU PGV TGL
PDB: 3ag2
PDB Description: Cytochrome c oxidase subunit 4 isoform 1, mitochondrial
UniProt: P00423
Hsap BLAST neighbor: P13073
Species: Bos taurus

Structure of domain e3ag2D1

Domains in the same chain:

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e3ag2D1 D:4-147 Mitochondrial cytochrome c oxidase subunit IV Mitochondrial cytochrome c oxidase subunit IV Mitochondrial cytochrome c oxidase subunit IV

Domains in the same PDB:

e3ag2A1 A:1-514 Cytochrome c oxidase subunit I-like Cytochrome c oxidase subunit I-like Cytochrome c oxidase subunit I-like
e3ag2B1 B:1-90 Cytochrome c oxidase subunit II-like, transmembrane region Cytochrome c oxidase subunit II-like, transmembrane region Cytochrome c oxidase subunit II-like, transmembrane region
e3ag2B2 B:91-227 Cupredoxin-like Cupredoxin-related Cupredoxin-related
e3ag2C1 C:3-261 Cytochrome c oxidase subunit III-like Cytochrome c oxidase subunit III-like Cytochrome c oxidase subunit III-like
e3ag2D1 D:4-147 Mitochondrial cytochrome c oxidase subunit IV Mitochondrial cytochrome c oxidase subunit IV Mitochondrial cytochrome c oxidase subunit IV
e3ag2E1 E:5-109 Repetitive alpha hairpins Cytochrome c oxidase subunit E Cytochrome c oxidase subunit E
e3ag2F1 F:1-98 Rubredoxin-like Rubredoxin-related Cytochrome c oxidase Subunit F
e3ag2G1 G:1-84 Mitochondrial cytochrome c oxidase subunit VIa Mitochondrial cytochrome c oxidase subunit VIa Mitochondrial cytochrome c oxidase subunit VIa
e3ag2H1 H:7-85 Cytochrome c oxidase subunit h Cytochrome c oxidase subunit h Cytochrome c oxidase subunit h
e3ag2I1 I:1-73 Mitochondrial cytochrome c oxidase subunit VIc Mitochondrial cytochrome c oxidase subunit VIc Mitochondrial cytochrome c oxidase subunit VIc
e3ag2J1 J:1-58 Mitochondrial cytochrome c oxidase subunit VIIa Mitochondrial cytochrome c oxidase subunit VIIa Mitochondrial cytochrome c oxidase subunit VIIa
e3ag2K1 K:6-54 Mitochondrial cytochrome c oxidase subunit VIIb Mitochondrial cytochrome c oxidase subunit VIIb Mitochondrial cytochrome c oxidase subunit VIIb
e3ag2L1 L:2-47 Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa) Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa) Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa)
e3ag2M1 M:1-43 Mitochondrial cytochrome c oxidase subunit VIIIb (aka IX) Mitochondrial cytochrome c oxidase subunit VIIIb (aka IX) Mitochondrial cytochrome c oxidase subunit VIIIb (aka IX)
e3ag2N1 N:1-514 Cytochrome c oxidase subunit I-like Cytochrome c oxidase subunit I-like Cytochrome c oxidase subunit I-like
e3ag2O1 O:1-90 Cytochrome c oxidase subunit II-like, transmembrane region Cytochrome c oxidase subunit II-like, transmembrane region Cytochrome c oxidase subunit II-like, transmembrane region
e3ag2O2 O:91-227 Cupredoxin-like Cupredoxin-related Cupredoxin-related
e3ag2P1 P:3-261 Cytochrome c oxidase subunit III-like Cytochrome c oxidase subunit III-like Cytochrome c oxidase subunit III-like
e3ag2Q1 Q:4-147 Mitochondrial cytochrome c oxidase subunit IV Mitochondrial cytochrome c oxidase subunit IV Mitochondrial cytochrome c oxidase subunit IV
e3ag2R1 R:5-109 Repetitive alpha hairpins Cytochrome c oxidase subunit E Cytochrome c oxidase subunit E
e3ag2S1 S:1-98 Rubredoxin-like Rubredoxin-related Cytochrome c oxidase Subunit F
e3ag2T1 T:1-84 Mitochondrial cytochrome c oxidase subunit VIa Mitochondrial cytochrome c oxidase subunit VIa Mitochondrial cytochrome c oxidase subunit VIa
e3ag2U1 U:7-85 Cytochrome c oxidase subunit h Cytochrome c oxidase subunit h Cytochrome c oxidase subunit h
e3ag2V1 V:1-73 Mitochondrial cytochrome c oxidase subunit VIc Mitochondrial cytochrome c oxidase subunit VIc Mitochondrial cytochrome c oxidase subunit VIc
e3ag2W1 W:1-58 Mitochondrial cytochrome c oxidase subunit VIIa Mitochondrial cytochrome c oxidase subunit VIIa Mitochondrial cytochrome c oxidase subunit VIIa
e3ag2X1 X:6-54 Mitochondrial cytochrome c oxidase subunit VIIb Mitochondrial cytochrome c oxidase subunit VIIb Mitochondrial cytochrome c oxidase subunit VIIb
e3ag2Y1 Y:2-47 Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa) Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa) Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa)
e3ag2Z1 Z:1-43 Mitochondrial cytochrome c oxidase subunit VIIIb (aka IX) Mitochondrial cytochrome c oxidase subunit VIIIb (aka IX) Mitochondrial cytochrome c oxidase subunit VIIIb (aka IX)

Structural contacts of domain e3ag2D1 of H-group "Mitochondrial cytochrome c oxidase subunit IV":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3ag2K1 D:X,Y,Z->K:x,y,z Mitochondrial cytochrome c oxidase subunit VIIb Interaction Interface Pymol
e3ag2A1 D:x,y,z->A:X,Y,Z Cytochrome c oxidase subunit I-like Interaction Interface Pymol
e3ag2E1 D:X,Y,Z->E:x,y,z Cytochrome c oxidase subunit E Interaction Interface Pymol
e3ag2B2 D:x,y,z->B:X,Y,Z Cupredoxin-related Interaction Interface Pymol
e3ag2B1 D:x,y,z->B:X,Y,Z Cytochrome c oxidase subunit II-like, transmembrane region Interaction Interface Pymol
e3ag2B2 D:-X+1/2,-Y+3,Z-1/2->B:x,y,z Cupredoxin-related Interaction Interface Pymol
e3ag2I1 D:X,Y,Z->I:x,y,z Mitochondrial cytochrome c oxidase subunit VIc Interaction Interface Pymol
e3ag2M1 D:X,Y,Z->M:x,y,z Mitochondrial cytochrome c oxidase subunit VIIIb (aka IX) Interaction Interface Pymol
e3ag2F1 D:X,Y,Z->F:x,y,z Rubredoxin-related Interaction Interface Pymol
e3ag2I1 D:-X+1/2,-Y+3,Z-1/2->I:x,y,z Mitochondrial cytochrome c oxidase subunit VIc Interaction Interface Pymol
e3ag2F1 D:x,y,z->F:-X+1/2,-Y+3,Z-1/2 Rubredoxin-related Interaction Interface Pymol