ECOD: domain e3aizA1

Domain ID e3aizA1

A: a+b two layers
X: DNA clamp
H: DNA clamp
T: DNA clamp
F: PCNA_N

UID:	000419288
Type:	Automatic domain
Parent:	e1iz5A1
Range:	A:1-127
Ligands:	SO4
PDB:	3aiz
PDB Description:	DNA POLYMERASE SLIDING CLAMP B
UniProt:	Q975M2
Species:

Domains in the same chain:

Download Pymol

e3aizA1	A:1-127	DNA clamp	DNA clamp	DNA clamp
e3aizA2	A:128-248	DNA clamp	DNA clamp	DNA clamp

Domains in the same PDB:

e3aizA1	A:1-127	DNA clamp	DNA clamp	DNA clamp
e3aizA2	A:128-248	DNA clamp	DNA clamp	DNA clamp
e3aizB1	B:1-127	DNA clamp	DNA clamp	DNA clamp
e3aizB2	B:128-248	DNA clamp	DNA clamp	DNA clamp
e3aizC1	C:1-125	DNA clamp	DNA clamp	DNA clamp
e3aizC2	C:126-246	DNA clamp	DNA clamp	DNA clamp
e3aizD1	D:1-125	DNA clamp	DNA clamp	DNA clamp
e3aizD2	D:126-245	DNA clamp	DNA clamp	DNA clamp

Structural contacts of domain e3aizA1 of H-group "DNA clamp":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e3aizC1	A:x,y,z->C:X-1/2,-Y+1/2,-Z	DNA clamp	Interaction Interface Pymol
e3aizD2	A:X,Y,Z->D:x,y,z	DNA clamp	Interaction Interface Pymol
e3aizC1	A:x,y,z->C:X-1,Y,Z	DNA clamp	Interaction Interface Pymol
e3aizC2	A:x,y,z->C:X-1,Y,Z	DNA clamp	Interaction Interface Pymol
e3aizC2	A:-X,-Y,Z->C:x,y,z	DNA clamp	Interaction Interface Pymol
e3aizA2	A:x,y,z->A:X-1/2,-Y+1/2,-Z	DNA clamp	Interaction Interface Pymol