| UID: | 000405448 |
|---|---|
| Type: | Automatic domain |
| Parent: | e1a79A2 |
| Range: | D:93-186 |
| Ligands: | GOL |
| PDB: | 3ajv |
| PDB Description: | tRNA-splicing endonuclease |
| UniProt: | Q9YBF1 |
| Hsap BLAST neighbor: | Q9BSV6 |
| Species: | Aeropyrum pernix |
Structure of domain e3ajvD2
Domains in the same chain:
Domains in the same PDB:
Structural contacts of domain e3ajvD2 of H-group "tRNA-intron endonuclease catalytic domain-like":
The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.
| Domain ID | Symmetry operator | H-group | Visualization |
|---|---|---|---|
| e3ajvC2 | D:x,y,z->C:X,Y,Z | tRNA-intron endonuclease catalytic domain-like | Interaction Interface Pymol |
| e3ajvA1 | D:x,y,z->A:X,Y,Z | tRNA-intron endonuclease catalytic domain-like | Interaction Interface Pymol |
| e3ajvB1 | D:x,y,z->B:X,Y,Z | tRNA-intron endonuclease catalytic domain-like | Interaction Interface Pymol |
| e3ajvB2 | D:-Y,X-Y,Z->B:x,y,z | tRNA-intron endonuclease N-terminal domain-like | Interaction Interface Pymol |
| e3ajvB1 | D:-Y,X-Y,Z->B:x,y,z | tRNA-intron endonuclease catalytic domain-like | Interaction Interface Pymol |
| e3ajvB1 | D:x,y,z->B:-Y+1,X-Y,Z | tRNA-intron endonuclease catalytic domain-like | Interaction Interface Pymol |
